RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 FOXB2Q5VYV0 432 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF627Q7L945 461 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 GATAD2BQ8WXI9 593 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 SPACA7Q96KW9 195 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 TMEM184CQ9NVA4 438 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 C2orf92A0A1B0GVN3 265 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 TAP2Q03519 686 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 OXA1LQ15070 435 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 LHFPL3Q86UP9 236 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 NXPE2Q96DL1 559 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZC3H10Q96K80 434 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 ACSS1Q9NUB1 689 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 MAP10Q9P2G4 905 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 ADAM29Q9UKF5 820 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 BMP4P12644 408 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 HTR2AP28223 471 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 PHC2Q8IXK0 858 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 SCAMP4Q969E2 229 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 SLC16A8O95907 504 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 HNRNPA1P09651 372 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 S1PR1P21453 382 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 CLECL1Q8IZS7 167 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 NAGSQ8N159 534 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 LINC01465Q8N7H1 131 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 L3MBTL4Q8NA19 623 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 P2RY13Q9BPV8 354 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 BOCQ9BWV1 1114 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 AGRPO00253 132 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 MRPL19P49406 292 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 KIAA0319Q5VV43 1072 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 CRTC1Q6UUV9 634 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 B3GNT4Q9C0J1 378 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 PSORS1C1Q9UIG5 152 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 ACSL6Q9UKU0 697 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 DOCK4Q8N1I0 1966 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 ANKRD33BA6NCL7 494 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 PIGKQ92643 395 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR2M2Q96R28 347 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 TP63Q9H3D4 680 aaPredicted RBP11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 AQP9O43315 295 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 ACTR1BP42025 376 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 ACTR1AP61163 376 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 FRMPD2BQ6IN97 320 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 ELOVL2Q9NXB9 296 aa11.21□□□□□ -0.61
CDC42BPA-202ENST00000366764 UBFD1O14562 309 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 SCG5P05408 212 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 UCHL1P09936 223 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 MLLT3P42568 568 aaPredicted RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 ART1P52961 327 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 SNRPGP62308 76 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 NOP16Q9Y3C1 178 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 ANK1P16157 1881 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 A8MV72 311 aaPredicted RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 RPS21P63220 83 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 RPL19P84098 196 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 DEFA5Q01523 94 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZNF267Q14586 743 aaPredicted RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 GARNL3Q5VVW2 1013 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR2AJ1Q8NGZ0 328 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 ADAMTS16Q8TE57 1224 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 NLKQ9UBE8 527 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 GRHPRQ9UBQ7 328 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZFR2Q9UPR6 939 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 IQCMA0A1B0GVH7 501 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZNF865P0CJ78 1059 aaPredicted RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLAMF1Q13291 335 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 MINDY4Q4G0A6 757 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 PAQR9Q6ZVX9 377 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 STX12Q86Y82 276 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 SIPA1Q96FS4 1042 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 PLCXD1Q9NUJ7 323 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 FBXO9Q9UK97 447 aaPredicted RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 ADAMTSL1Q8N6G6 1762 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 A0A1W2PQ09 198 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 CCKBRP32239 447 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 MORN1Q5T089 497 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 CEP68Q76N32 757 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 CPXM2Q8N436 756 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 ING5Q8WYH8 240 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 KLHL9Q9P2J3 617 aa11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 XIRP1Q702N8 1843 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-202ENST00000366764 TRBV2A0A0J9YWF9 115 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 C21orf33P30042 268 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 CDC20Q12834 499 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 KIAA1211LQ6NV74 962 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 ASPGQ86U10 573 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 BCL2L14Q9BZR8 327 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 FBRSQ9HAH7 460 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 SPHK2Q9NRA0 654 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 RGS17Q9UGC6 210 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 RPS26P62854 115 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 PAAF1Q9BRP4 392 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 ALG8Q9BVK2 526 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 TMEM38AQ9H6F2 299 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 NIPAL2Q9H841 368 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 PCDHGA3Q9Y5H0 932 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 ANKRD28O15084 1053 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 RFPL3O75679 317 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 PRH1P02810 166 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 MMP12P39900 470 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms