RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SLC6A5Q9Y345 797 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 IGKV6D-41A0A0C4DH26 115 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 EEF1E1-BLOC1S5C9J1V9 151 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ARPC1BO15143 372 aaKnown RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 GBAP04062 536 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 TIA1P31483 386 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 UBXN11Q5T124 520 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 Q8N9G6 341 aaPredicted RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 OR14A2Q96R54 314 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 GAL3ST4Q96RP7 486 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 MYO16Q9Y6X6 1858 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 DOCK11Q5JSL3 2073 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ADAM10O14672 748 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 NPC1O15118 1278 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 NDUFV2P19404 249 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SIAH1Q8IUQ4 282 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 LYSMD2Q8IV50 215 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SLC5A8Q8N695 610 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF454Q8N9F8 522 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 OR4C15Q8NGM1 316 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SETD7Q8WTS6 366 aaKnown RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 LIPT1Q9Y234 373 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SCAMP2O15127 329 aaKnown RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 KCNJ5P48544 419 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 FLI1Q01543 452 aaPredicted RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 OXA1LQ15070 435 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF783Q6ZMS7 281 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 GPAT4Q86UL3 456 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 THAP4Q8WY91 577 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 MOCOSQ96EN8 888 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 RIPK3Q9Y572 518 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ZNFX1Q9P2E3 1918 aaKnown RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 MYLKQ15746 1914 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 TRAPPC2P0DI81 140 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 TRAPPC2BP0DI82 140 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 TYRP14679 529 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ARSBP15848 533 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 POLR2CP19387 275 aaPredicted RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 DDCP20711 480 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 NFYAP23511 347 aaPredicted RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 CD52P31358 61 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 GABRA5P31644 462 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 MAGEA3P43357 314 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 VSX2P58304 361 aaPredicted RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 APOFQ13790 326 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 RNASE10Q5GAN6 216 aaKnown RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 KCT2Q8NC54 265 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 OR13C3Q8NGS6 347 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SCAMP5Q8TAC9 235 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 TBL1XR1Q9BZK7 514 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 HS3ST4Q9Y661 456 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 MTCL1Q9Y4B5 1905 aaKnown RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 RFXAPO00287 272 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 SLC16A8O95907 504 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 AKAIN1P0CW23 69 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 PCSK6P29122 969 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 OR1D2P34982 312 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 LSSP48449 732 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 MLLT11Q13015 90 aaPredicted RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 LAX1Q8IWV1 398 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 KDM1BQ8NB78 822 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 NAA50Q9GZZ1 169 aaKnown RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 METTL17Q9H7H0 456 aaPredicted RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF701Q9NV72 531 aaPredicted RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF736B4DX44 427 aaPredicted RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 CDKN2DP55273 166 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 TAP2Q03519 686 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 BCL2A1Q16548 175 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 AGTRAPQ6RW13 159 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF546Q86UE3 836 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 NRROSQ86YC3 692 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 CERS5Q8N5B7 392 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 C10orf90Q96M02 699 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 CDC6Q99741 560 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 RDH14Q9HBH5 336 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 PARPBPQ9NWS1 579 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 SH3BGRL2Q9UJC5 107 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 ATG4BQ9Y4P1 393 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 P2RX6O15547 441 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 PQBP1O60828 265 aaKnown RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 BEST1O76090 585 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 ADH1AP07327 375 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 SMIM18P0DKX4 95 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 SOX9P48436 509 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 VGLL4Q14135 290 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 FLYWCH1Q4VC44 716 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 TMEM200AQ86VY9 491 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 SLC22A18Q96BI1 424 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 FAM46AQ96IP4 442 aaKnown RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 PRRT1Q99946 306 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 DPEP2Q9H4A9 486 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 CENPMQ9NSP4 180 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 LUZP4Q9P127 313 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 WDR45Q9Y484 360 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 EFCAB7A8K855 629 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 FGF4P08620 206 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 DPEP1P16444 411 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 C21orf33P30042 268 aaPredicted RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 NUDT1P36639 197 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 INHBCP55103 352 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms