RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TGM1P22735 817 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 GADD45AP24522 165 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 PEBP1P30086 187 aaKnown RBP13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 LIM2P55344 173 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 RPS3AP61247 264 aaKnown RBP13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 HYAL2Q12891 473 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 PTGES3Q15185 160 aaKnown RBP13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 SYT16Q17RD7 645 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D3GQ6DHY5 549 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 FRMPD2BQ6IN97 320 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D3CQ6IPX1 549 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 PLEKHG7Q6ZR37 379 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D3Q8IZP1 549 aaPredicted RBP13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TBC1D19Q8N5T2 526 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 FAM46DQ8NEK8 389 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 OR2L3Q8NG85 312 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 MS4A6EQ96DS6 147 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 AMDHD1Q96NU7 426 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 RACGAP1Q9H0H5 632 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 C6orf106Q9H6K1 298 aaPredicted RBP13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 SLC35C2Q9NQQ7 365 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 SCHIP1Q9P0W5 487 aaPredicted RBP13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 NCDNQ9UBB6 729 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 RHCGQ9UBD6 479 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 NDOR1Q9UHB4 597 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 UGT2A1Q9Y4X1 527 aa13.46□□□□□ -0.25
NIPAL3-203ENST00000358028 TMEM247A6NEH6 219 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 C4orf51C9J302 202 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 FAAHO00519 579 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 SCAMP1O15126 338 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 SLC28A2O43868 658 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 KDM1AO60341 852 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 FUT4P22083 530 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 CMPK1P30085 196 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 NTSP30990 170 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 GPC1P35052 558 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 RGS6P49758 472 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 LIMK1P53667 647 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 SNRPGP62308 76 aaKnown RBP13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 SLC9A5Q14940 896 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ZNF181Q2M3W8 571 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 AGAP7PQ5VUJ5 663 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 KLHL17Q6TDP4 642 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 B3GNT7Q8NFL0 401 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 GTPBP3Q969Y2 492 aaKnown RBP13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 Q96MT0 163 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 OR2M4Q96R27 311 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ZNF607Q96SK3 696 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 UCK2Q9BZX2 261 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ARRDC1-AS1Q9H2J1 176 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 OR51I1Q9H343 314 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 KIR3DX1Q9H7L2 352 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 NMNAT1Q9HAN9 279 aaPredicted RBP13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 FGF22Q9HCT0 170 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 TRNAU1APQ9NX07 287 aaKnown RBP13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 MS4A12Q9NXJ0 267 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 P2RX2Q9UBL9 471 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 GMEB2Q9UKD1 530 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 HEBP2Q9Y5Z4 205 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 TMEM131Q92545 1883 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 FFAR1O14842 300 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 SLC31A1O15431 190 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ERI3O43414 337 aaKnown RBP13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 OR12D1P0DN82 309 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 OSMP13725 252 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 HOXB3P14651 431 aaPredicted RBP13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 POU2F1P14859 743 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 CHMP24386 653 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 AHRP35869 848 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 KCNJ5P48544 419 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 NCBP2P52298 156 aaKnown RBP eCLIP13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ARFIP1P53367 373 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 PPP2CBP62714 309 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 PPP2CAP67775 309 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 IFITM3Q01628 133 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ZNF45Q02386 682 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 PRKCDQ05655 676 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 SLAMF1Q13291 335 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ARMCX4Q5H9R4 360 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 TMEM201Q5SNT2 666 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 PERM1Q5SV97 790 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 MEDAGQ5VYS4 303 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 LYSMD4Q5XG99 296 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ABHD17CQ6PCB6 329 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 C19orf48Q6RUI8 117 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 MFSD9Q8NBP5 474 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 TMEM145Q8NBT3 493 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 OR8K5Q8NH50 307 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ITFG2Q969R8 447 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 LOXL4Q96JB6 756 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ZNF354BQ96LW1 612 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 BBS4Q96RK4 519 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 MACROD1Q9BQ69 325 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 SARGQ9BW04 601 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 RSPO3Q9BXY4 272 aaPredicted RBP13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 SMOC1Q9H4F8 434 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 SP140LQ9H930 580 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 PRDM7Q9NQW5 492 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 TMEM74BQ9NUR3 256 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 SPHK1Q9NYA1 384 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms