RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ETFAP13804 333 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 CRATP43155 626 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 TGIF1Q15583 401 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 ADRM1Q16186 407 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 PAPD4Q6PIY7 484 aaKnown RBP25.19■■□□□ 1.62
SSBP4-202ENST00000348495 PPP1R32Q7Z5V6 425 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 HPS6Q86YV9 775 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 HORMAD2Q8N7B1 307 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 NACC2Q96BF6 587 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 ART5Q96L15 291 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 OR8D2Q9GZM6 311 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 OR10A5Q9H207 317 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 SOCS6O14544 535 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 PRAMEF2O60811 474 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 NQO1P15559 274 aaKnown RBP25.18■■□□□ 1.62
SSBP4-202ENST00000348495 MATN1P21941 496 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 MAP3K8P41279 467 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 SLC37A1P57057 533 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 PCOLCEQ15113 449 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 KIRREL2Q6UWL6 708 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 OR1N1Q8NGS0 311 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 LPAR4Q99677 370 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 ACTRT3Q9BYD9 372 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 EQTNQ9NQ60 294 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 IL17BQ9UHF5 180 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 SLC7A8Q9UHI5 535 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 BCAP29Q9UHQ4 241 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 USP22Q9UPT9 525 aa25.18■■□□□ 1.62
SSBP4-202ENST00000348495 CFAP73A6NFT4 308 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 NUDT7P0C024 238 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 ID4P47928 161 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 EEF1A2Q05639 463 aaKnown RBP25.17■■□□□ 1.62
SSBP4-202ENST00000348495 FXNQ16595 210 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 ZCCHC12Q6PEW1 402 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 FAM156AQ8NDB6 213 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 B3GNT7Q8NFL0 401 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 NUDT9Q9BW91 350 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 ZNF700Q9H0M5 742 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 MSRB2Q9Y3D2 182 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 HEMK1Q9Y5R4 338 aaPredicted RBP25.17■■□□□ 1.62
SSBP4-202ENST00000348495 IGHV1-45A0A0A0MS14 117 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 FAM220BPB1ANY3 271 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 HMGN4O00479 90 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 COX6A1P12074 109 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 ME2P23368 584 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 PRIM2P49643 509 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 TXNL4AP83876 142 aaKnown RBP25.17■■□□□ 1.62
SSBP4-202ENST00000348495 TNFAIP8L2Q6P589 184 aaPredicted RBP25.17■■□□□ 1.62
SSBP4-202ENST00000348495 PTOV1Q86YD1 416 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 LGI4Q8N135 537 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 C16orf52Q8NHV5 167 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 REXO5Q96IC2 774 aaKnown RBP25.17■■□□□ 1.62
SSBP4-202ENST00000348495 VSTM2LQ96N03 204 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 YIPF4Q9BSR8 244 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 SPATA9Q9BWV2 254 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 SEMA4CQ9C0C4 833 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 OR51I1Q9H343 314 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 PIF1Q9H611 641 aa25.17■■□□□ 1.62
SSBP4-202ENST00000348495 FAF1Q9UNN5 650 aaPredicted RBP25.17■■□□□ 1.62
SSBP4-202ENST00000348495 MRPS18BQ9Y676 258 aaKnown RBP25.17■■□□□ 1.62
SSBP4-202ENST00000348495 SEC24DO94855 1032 aaPredicted RBP25.16■■□□□ 1.62
SSBP4-202ENST00000348495 KHKP50053 298 aa25.16■■□□□ 1.62
SSBP4-202ENST00000348495 CYP51A1Q16850 503 aa25.16■■□□□ 1.62
SSBP4-202ENST00000348495 CDC73Q6P1J9 531 aa25.16■■□□□ 1.62
SSBP4-202ENST00000348495 IFNEQ86WN2 208 aa25.16■■□□□ 1.62
SSBP4-202ENST00000348495 CDRT4Q8N9R6 151 aa25.16■■□□□ 1.62
SSBP4-202ENST00000348495 OR2T12Q8NG77 320 aa25.16■■□□□ 1.62
SSBP4-202ENST00000348495 OR11G2Q8NGC1 345 aa25.16■■□□□ 1.62
SSBP4-202ENST00000348495 OR5D16Q8NGK9 328 aa25.16■■□□□ 1.62
SSBP4-202ENST00000348495 KCTD14Q9BQ13 255 aaPredicted RBP25.16■■□□□ 1.62
SSBP4-202ENST00000348495 GPN2Q9H9Y4 310 aaPredicted RBP25.16■■□□□ 1.62
SSBP4-202ENST00000348495 FOLH1BQ9HBA9 442 aa25.16■■□□□ 1.62
SSBP4-202ENST00000348495 DTX4Q9Y2E6 619 aa25.16■■□□□ 1.62
SSBP4-202ENST00000348495 ASNA1O43681 348 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 TCN1P20061 433 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-202ENST00000348495 MSX2P35548 267 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-202ENST00000348495 SLC26A5P58743 744 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 DSTNP60981 165 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 IL10RAQ13651 578 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 WDR53Q7Z5U6 358 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-202ENST00000348495 ZZZ3Q8IYH5 903 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 SLC16A11Q8NCK7 471 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 APCDD1LQ8NCL9 501 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 NCLNQ969V3 563 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 IMMP1LQ96LU5 166 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 RAB3IPQ96QF0 476 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-202ENST00000348495 OR7D2Q96RA2 312 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 LMF2Q9BU23 707 aaKnown RBP25.15■■□□□ 1.62
SSBP4-202ENST00000348495 TMEM38AQ9H6F2 299 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 SUCOQ9UBS9 1254 aaKnown RBP25.15■■□□□ 1.62
SSBP4-202ENST00000348495 AKAP13Q12802 2813 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 ACP2P11117 423 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 HTR1EP28566 365 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 GCNT6Q5T4J0 391 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 RNF111Q6ZNA4 994 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 PTRH1Q86Y79 214 aaKnown RBP25.15■■□□□ 1.62
SSBP4-202ENST00000348495 AMER2Q8N7J2 671 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 RAB8BQ92930 207 aa25.15■■□□□ 1.62
SSBP4-202ENST00000348495 KIAA1143Q96AT1 154 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-202ENST00000348495 GIN1Q9NXP7 522 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms