RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 EPOPA6NHQ4 379 aa15.52■□□□□ 0.08
SMARCA4-201ENST00000344626 RNASET2O00584 256 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-201ENST00000344626 PABPC4LP0CB38 370 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-201ENST00000344626 MFSD13AQ14CX5 517 aa15.52■□□□□ 0.08
SMARCA4-201ENST00000344626 HENMT1Q5T8I9 393 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-201ENST00000344626 FIP1L1Q6UN15 594 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-201ENST00000344626 ERMP1Q7Z2K6 904 aa15.52■□□□□ 0.08
SMARCA4-201ENST00000344626 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.52■□□□□ 0.08
SMARCA4-201ENST00000344626 SGTBQ96EQ0 304 aa15.52■□□□□ 0.08
SMARCA4-201ENST00000344626 KCMF1Q9P0J7 381 aa15.52■□□□□ 0.08
SMARCA4-201ENST00000344626 KLK10O43240 276 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 DCAF7P61962 342 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 ZXDAP98168 799 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 KIAA0907Q7Z7F0 614 aaPredicted RBP15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 ETFBKMTQ8IXQ9 262 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 KBTBD2Q8IY47 623 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 PRR22Q8IZ63 422 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 GAB3Q8WWW8 586 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 TBX1O43435 398 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 SLC36A3Q495N2 470 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 HMGN2P46Q86SG4 172 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 PARP8Q8N3A8 854 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 MEIOBQ8N635 442 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 THEM6Q8WUY1 208 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 TBX5Q99593 518 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 PCED1AQ9H1Q7 454 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 BRD7Q9NPI1 651 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 SACM1LQ9NTJ5 587 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 SMOXQ9NWM0 555 aa15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 GPC6Q9Y625 555 aaPredicted RBP15.52■□□□□ 0.07
SMARCA4-201ENST00000344626 UNC119BA6NIH7 251 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 VILLO15195 856 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 POU2F2P09086 479 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 MPP2Q14168 576 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 FAM189A2Q15884 450 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 SLC25A24Q6NUK1 477 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 KLHL17Q6TDP4 642 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 TMEM92Q6UXU6 159 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 THRSPQ92748 146 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 IL4I1Q96RQ9 567 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 CLCC1Q96S66 551 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 CUEDC1Q9NWM3 386 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 TBC1D29Q9UFV1 150 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 LOXHD1Q8IVV2 1947 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 ADAMTSL1Q8N6G6 1762 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 A0A1W2PPL8 197 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 ANHXE9PGG2 379 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 E2F3O00716 465 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 CD46P15529 392 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 SLC5A2P31639 672 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 SLC15A1P46059 708 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 RBM48Q5RL73 367 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 ZSWIM9Q86XI8 627 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 CCL4L1Q8NHW4 92 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 PTBP2Q9UKA9 531 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 RPH3AQ9Y2J0 694 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 TTC3P53804 2025 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 LDB3O75112 727 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 OR1E2P47887 323 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 IL18R1Q13478 541 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 OPN5Q6U736 354 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 CREB3L4Q8TEY5 395 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 MYEOVQ96EZ4 313 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 RADILQ96JH8 1075 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 CHRDQ9H2X0 955 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 BDP1A6H8Y1 2624 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 FOXE1O00358 373 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 ZNF208O43345 1280 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 RHCEP18577 417 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 CDH11P55287 796 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 PPP2R2BQ00005 443 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 ATOH8Q96SQ7 321 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 POLR2J2Q9GZM3 115 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 CXorf56Q9H5V9 222 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 RHCGQ9UBD6 479 aa15.51■□□□□ 0.07
SMARCA4-201ENST00000344626 C11orf98E9PRG8 122 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 KCNK5O95279 499 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 VASPP50552 380 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 RPS26P62854 115 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 MAT1AQ00266 395 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 ALDH16A1Q8IZ83 802 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 LILRA3Q8N6C8 439 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 OR9A2Q8NGT5 310 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 KIR3DX1Q9H7L2 352 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 TAS2R7Q9NYW3 318 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 A0A1W2PQ72 361 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 NADKO95544 446 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 EDNRAP25101 427 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 RAB38P57729 211 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 GPR19Q15760 415 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 CES4AQ5XG92 561 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 ALG1LQ6GMV1 187 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 C1orf94Q6P1W5 598 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 CLECL1Q8IZS7 167 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 RSC1A1Q92681 617 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 LYSMD1Q96S90 227 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 DHRS4Q9BTZ2 278 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 PLRG1O43660 514 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 ADORA3P0DMS8 318 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 ALDH3A2P51648 485 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms