RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 C1orf146Q5VVC0 180 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 CDC73Q6P1J9 531 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 CPEB2Q7Z5Q1 589 aaKnown RBP13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 MARCH9Q86YJ5 346 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 MICU2Q8IYU8 434 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 METTL25Q8N6Q8 603 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 SLC2A12Q8TD20 617 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 GIMAP5Q96F15 307 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 SENP5Q96HI0 755 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 VPS50Q96JG6 964 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 LPAR4Q99677 370 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 TRIM15Q9C019 465 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 A4GALTQ9NPC4 353 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 DUSP22Q9NRW4 184 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 PRODH2Q9UF12 536 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 MAGEL2Q9UJ55 1249 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 PPIEQ9UNP9 301 aaKnown RBP13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 POMPQ9Y244 141 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 FARSAQ9Y285 508 aaKnown RBP13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 SNX13Q9Y5W8 968 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 OR6C76A6NM76 312 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 HMGN4O00479 90 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 DDAH2O95865 285 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 PCGF2P35227 344 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 RPS26P62854 115 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 DMTNQ08495 405 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 VEZF1Q14119 521 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 FLOT2Q14254 428 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 EXOSC7Q15024 291 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 ADRM1Q16186 407 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 ATAD3BQ5T9A4 648 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 FAAH2Q6GMR7 532 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 TNFAIP8L2Q6P589 184 aaPredicted RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 RNF111Q6ZNA4 994 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 DTX1Q86Y01 620 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 C10orf111Q8N326 155 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 HORMAD2Q8N7B1 307 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 FAM156AQ8NDB6 213 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 FAM13CQ8NE31 585 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 B3GNT7Q8NFL0 401 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 OR52R1Q8NGF1 315 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 JADE3Q92613 823 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 HOXB13Q92826 284 aaPredicted RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 POP5Q969H6 163 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 KIAA1143Q96AT1 154 aaPredicted RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 STACQ99469 402 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 OR8D2Q9GZM6 311 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 OR10A5Q9H207 317 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 OR51I1Q9H343 314 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 ANKRA2Q9H9E1 313 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 EQTNQ9NQ60 294 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 ACTR3BQ9P1U1 418 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 P2RX2Q9UBL9 471 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 LIPT1Q9Y234 373 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 RRP15Q9Y3B9 282 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 HEMK1Q9Y5R4 338 aaPredicted RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 H0YHG0 523 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 TERTO14746 1132 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 GSTA4O15217 222 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 C1QCP02747 245 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 LIPCP11150 499 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 SSTR4P31391 388 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 DLSTP36957 453 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 MAN2A2P49641 1150 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 SLC37A1P57057 533 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 ZNF155Q12901 538 aaPredicted RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 SSPNQ14714 243 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 EXOSC6Q5RKV6 272 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 INTS11Q5TA45 600 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 PAPD4Q6PIY7 484 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 DHFR2Q86XF0 187 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 PROSER1Q86XN7 944 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 ZZZ3Q8IYH5 903 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 IL22RA1Q8N6P7 574 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 ZNF615Q8N8J6 731 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 OR1N1Q8NGS0 311 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 ADAMTS15Q8TE58 950 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 NKD1Q969G9 470 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 FAM122AQ96E09 287 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 SERHL2Q9H4I8 314 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 PIF1Q9H611 641 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 EXD2Q9NVH0 621 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 PACSIN3Q9UKS6 424 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 AK5Q9Y6K8 562 aa13.53□□□□□ -0.24
NIPAL3-202ENST00000339255 HRKO00198 91 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 ACOT8O14734 319 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 ARPC2O15144 300 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 AK1P00568 194 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 ALOX5P09917 674 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 ARAFP10398 606 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 GGT1P19440 569 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 EMDP50402 254 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 FOXL2P58012 376 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 PSPHP78330 225 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 MTX3Q5HYI7 312 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 LCN8Q6JVE9 175 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 PTOV1Q86YD1 416 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 C10orf67Q8IYJ2 551 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 C16orf52Q8NHV5 167 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms