RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 NANOGP8Q6NSW7 305 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 TNFAIP8L2Q6P589 184 aaPredicted RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 GPR155Q7Z3F1 870 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 HMGN2P46Q86SG4 172 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 RNF130Q86XS8 419 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 OR2L13Q8N349 312 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 C16orf52Q8NHV5 167 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 KCNE4Q8WWG9 221 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 CRELD1Q96HD1 420 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 CPPED1Q9BRF8 314 aaPredicted RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 NANOGQ9H9S0 305 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 CLCA3PQ9Y6N3 262 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 A0A096LPI6 279 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 SAGE2PA6NJ88 616 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 DNAJB5O75953 348 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 SLC37A1P57057 533 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 SERTAD2Q14140 314 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 MLC1Q15049 377 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 TRMT5Q32P41 509 aaKnown RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 ANGPTL8Q6UXH0 198 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 NPSR1Q6W5P4 371 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 HORMAD2Q8N7B1 307 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 NUP43Q8NFH3 380 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 MAL2Q969L2 176 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 IMMP1LQ96LU5 166 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 GPATCH1Q9BRR8 931 aaKnown RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 GPR87Q9BY21 358 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 YIPF3Q9GZM5 350 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 LRMDAQ9H2I8 198 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 TPT1P8Q9HAU6 139 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 SEMA3GQ9NS98 782 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 DDX18Q9NVP1 670 aaKnown RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.35■□□□□ 0.05
SHOX-201ENST00000334060 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 BCAP29Q9UHQ4 241 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 TMEM200CA6NKL6 621 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 NME4O00746 187 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 KCNH1O95259 989 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 PSMG1O95456 288 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 ETFAP13804 333 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 SLC26A5P58743 744 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 KCNJ2P63252 427 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 FUT7Q11130 342 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 MAP4K2Q12851 820 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 SSPNQ14714 243 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 MAPRE2Q15555 327 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 SPDYE7PQ495Y7 208 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 RUNDC3AQ59EK9 446 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 C6orf120Q7Z4R8 191 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 SPACA3Q8IXA5 215 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 SLC16A11Q8NCK7 471 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 ZNF675Q8TD23 568 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 TUBB6Q9BUF5 446 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 ITPAQ9BY32 194 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 OR10A5Q9H207 317 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 CCDC86Q9H6F5 360 aaKnown RBP15.34■□□□□ 0.05
SHOX-201ENST00000334060 RMND5AQ9H871 391 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 CPNE5Q9HCH3 593 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 FBXO34Q9NWN3 711 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 PADI2Q9Y2J8 665 aa15.34■□□□□ 0.05
SHOX-201ENST00000334060 ENO4A6NNW6 628 aa15.33■□□□□ 0.05
SHOX-201ENST00000334060 ACP2P11117 423 aa15.33■□□□□ 0.05
SHOX-201ENST00000334060 RNF144AP50876 292 aaPredicted RBP15.33■□□□□ 0.05
SHOX-201ENST00000334060 SLC7A2P52569 658 aa15.33■□□□□ 0.05
SHOX-201ENST00000334060 STX5Q13190 355 aa15.33■□□□□ 0.05
SHOX-201ENST00000334060 BTBD16Q32M84 506 aa15.33■□□□□ 0.05
SHOX-201ENST00000334060 SAXO2Q658L1 398 aa15.33■□□□□ 0.05
SHOX-201ENST00000334060 DEFB107AQ8IZN7 70 aa15.33■□□□□ 0.05
SHOX-201ENST00000334060 TSPEARQ8WU66 669 aa15.33■□□□□ 0.05
SHOX-201ENST00000334060 PIK3R3Q92569 461 aa15.33■□□□□ 0.05
SHOX-201ENST00000334060 C19orf53Q9UNZ5 99 aaPredicted RBP15.33■□□□□ 0.05
SHOX-201ENST00000334060 BSNQ9UPA5 3926 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 GXYLT2A0PJZ3 443 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 BLACEA4D250 179 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 CLIC1O00299 241 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 PLOD2O00469 737 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 PDE5AO76074 875 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 KRT16P08779 473 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 ITGAMP11215 1152 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 PSME3P61289 254 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 FUT5Q11128 374 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 MAPK11Q15759 364 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 CCNJQ5T5M9 372 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 B3GNTL1Q67FW5 361 aaPredicted RBP15.33■□□□□ 0.04
SHOX-201ENST00000334060 SLC15A3Q8IY34 581 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 PRR22Q8IZ63 422 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 SNIP1Q8TAD8 396 aaKnown RBP15.33■□□□□ 0.04
SHOX-201ENST00000334060 JADE3Q92613 823 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 TMEM125Q96AQ2 219 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 FBXL20Q96IG2 436 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 PHF12Q96QT6 1004 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 GAL3ST4Q96RP7 486 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 ZNF700Q9H0M5 742 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 EFCAB1Q9HAE3 211 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 TMEM45AQ9NWC5 275 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 KCND3Q9UK17 655 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 VPS4AQ9UN37 437 aa15.33■□□□□ 0.04
SHOX-201ENST00000334060 TRBV11-1A0A0K0K1C0 115 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 BBIP1A8MTZ0 92 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 PLOD3O60568 738 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms