RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 TREX2Q9BQ50 279 aaPredicted RBP13.5□□□□□ -0.25
CHRNA3-201ENST00000326828 MARVELD1Q9BSK0 173 aa13.5□□□□□ -0.25
CHRNA3-201ENST00000326828 DMRT3Q9NQL9 472 aa13.5□□□□□ -0.25
CHRNA3-201ENST00000326828 CFAP97Q9P2B7 532 aa13.5□□□□□ -0.25
CHRNA3-201ENST00000326828 HELZP42694 1942 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 PRKRAO75569 313 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SLC2A10O95528 541 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 LIMS3P0CW19 117 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 LIMS4P0CW20 117 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 MPC1LP0DKB6 136 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 OR10A3P58181 314 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SUZ12Q15022 739 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SF3A2Q15428 464 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 NTRK2Q16620 822 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 FAAH2Q6GMR7 532 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SMARCD3Q6STE5 483 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 IDO2Q6ZQW0 420 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 ADGRD2Q7Z7M1 963 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 TRAPPC5Q8IUR0 188 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 IQCF2Q8IXL9 164 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 TEX47Q8TBZ9 253 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SPRYD4Q8WW59 207 aaPredicted RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 FAM46AQ96IP4 442 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 C12orf66Q96MD2 445 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 F2RL3Q96RI0 385 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SECISBP2Q96T21 854 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 THAP7Q9BT49 309 aaPredicted RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SSNA1O43805 119 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 ELNP15502 786 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 CCND3P30281 292 aaPredicted RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 TALDO1P37837 337 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 CRYZQ08257 329 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 ARHGEF6Q15052 776 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 CDKL4Q5MAI5 379 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 TIGD3Q6B0B8 471 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 BHLHB9Q6PI77 547 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 ESPNLQ6ZVH7 1005 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 LUZP2Q86TE4 346 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 RASGEF1AQ8N9B8 481 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 OR51G2Q8NGK0 314 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 DNAJA4Q8WW22 397 aaPredicted RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 ARSGQ96EG1 525 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 BRF2Q9HAW0 419 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 EQTNQ9NQ60 294 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 IMP3Q9NV31 184 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 Q9Y3F1 56 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 A0A0B4J203 849 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 CPSF4LA6NMK7 179 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SOCS5O75159 536 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SLC43A1O75387 559 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 GIFP27352 417 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 PCDH1Q08174 1060 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SPOUT1Q5T280 376 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SYT9Q86SS6 491 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 LRRTM4Q86VH4 590 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 PIAS4Q8N2W9 510 aaPredicted RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 CBARPQ8N350 705 aaPredicted RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 BMPERQ8N8U9 685 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 DUSP18Q8NEJ0 188 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 BBS10Q8TAM1 723 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SMG7Q92540 1137 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 RNF32Q9H0A6 362 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 ISG20L2Q9H9L3 353 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 TDP1Q9NUW8 608 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 NTNG1Q9Y2I2 539 aa13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 SF3B6Q9Y3B4 125 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-201ENST00000326828 FEZF1A0PJY2 475 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 SNTNA6NMZ2 147 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 TMEM189-UBE2V1I3L0A0 370 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 HYAL3O43820 417 aaPredicted RBP13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 LGI1O95970 557 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 SOD1P00441 154 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 GALTP07902 379 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 TFPIP10646 304 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 NPPBP16860 134 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 CTGFP29279 349 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 GABRA5P31644 462 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 SP140Q13342 867 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 HIST2H2AA3Q6FI13 130 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 FAM71E1Q6IPT2 247 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 DNAJB7Q7Z6W7 309 aaPredicted RBP13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 IZUMO1Q8IYV9 350 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 GPR135Q8IZ08 494 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 HMGB4Q8WW32 186 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 C17orf62Q9BQA9 187 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 SPRTNQ9H040 489 aaPredicted RBP13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 CLEC4MQ9H2X3 399 aaPredicted RBP13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 PCDHGB7Q9Y5F8 929 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 POM121CA8CG34 1229 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 TP53P04637 393 aaPredicted RBP13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 UQCRC2P22695 453 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 STOMP27105 288 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 GPR4P46093 362 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 AP2S1P53680 142 aaPredicted RBP13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 ZMYND11Q15326 602 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 MZT2AQ6P582 158 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 TMEM91Q6ZNR0 172 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 NR2C2APQ86WQ0 139 aa13.48□□□□□ -0.25
CHRNA3-201ENST00000326828 KIF18BQ86Y91 864 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms