RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 FOXN4Q96NZ1 517 aa15.38■□□□□ 0.05
SSRP1-202ENST00000293880 ABCG5Q9H222 651 aa15.38■□□□□ 0.05
SSRP1-202ENST00000293880 C19orf12Q9NSK7 152 aa15.38■□□□□ 0.05
SSRP1-202ENST00000293880 MARCH4Q9P2E8 410 aaPredicted RBP15.38■□□□□ 0.05
SSRP1-202ENST00000293880 CREBL2O60519 120 aaPredicted RBP15.37■□□□□ 0.05
SSRP1-202ENST00000293880 ALDOAP04075 364 aaKnown RBP15.37■□□□□ 0.05
SSRP1-202ENST00000293880 SSTR2P30874 369 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 ETV5P41161 510 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 DPP6P42658 865 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 PLCXD2Q0VAA5 305 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 RSU1Q15404 277 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 PCGF3Q3KNV8 242 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 C6orf89Q6UWU4 347 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 OR14A2Q96R54 314 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 PITX2Q99697 317 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 SEZ6LQ9BYH1 1024 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 CCM2LQ9NUG4 571 aaPredicted RBP15.37■□□□□ 0.05
SSRP1-202ENST00000293880 CA12O43570 354 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 ALDOBP05062 364 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 ASGR2P07307 311 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 FBLP22087 321 aaKnown RBP15.37■□□□□ 0.05
SSRP1-202ENST00000293880 SLC11A1P49279 550 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 NPRL3Q12980 569 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 FAM198BQ6UWH4 519 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 IFNL1Q8IU54 200 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 PLEKHO2Q8TD55 490 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 SAMD10Q9BYL1 202 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 COCHO43405 550 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 PFKLP17858 780 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 SLC10A2Q12908 348 aaPredicted RBP15.37■□□□□ 0.05
SSRP1-202ENST00000293880 PIWIL3Q7Z3Z3 882 aaKnown RBP15.37■□□□□ 0.05
SSRP1-202ENST00000293880 ASPGQ86U10 573 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 LILRB2Q8N423 598 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 ZFAND2BQ8WV99 257 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 SIGLEC10Q96LC7 697 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 SMIM3Q9BZL3 60 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 NCDNQ9UBB6 729 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 BHLHE40O14503 412 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 NCR1O76036 304 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 KLF8O95600 359 aaPredicted RBP15.37■□□□□ 0.05
SSRP1-202ENST00000293880 CD53P19397 219 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 PBX2P40425 430 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 TPGS2Q68CL5 300 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 FAM46BQ96A09 425 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 COQ10AQ96MF6 247 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 PTCHD1Q96NR3 888 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 SERTAD4Q9NUC0 356 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 TMEM9Q9P0T7 183 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 ART1P52961 327 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 DEFB134Q4QY38 66 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 C14orf28Q4W4Y0 310 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 OR51T1Q8NGJ9 327 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 IGSF8Q969P0 613 aa15.37■□□□□ 0.05
SSRP1-202ENST00000293880 FBXO45P0C2W1 286 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 ZNF30P17039 623 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 ZNF84P51523 738 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 TDGQ13569 410 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 CEACAM7Q14002 265 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 TP53I3Q53FA7 332 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 Q6ZVL8 140 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 ZFAND4Q86XD8 727 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 SERPINA12Q8IW75 414 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 PNPLA1Q8N8W4 532 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 OR56B2PQ8NGI1 322 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 TMEM125Q96AQ2 219 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 FUBP3Q96I24 572 aaKnown RBP eCLIP15.36■□□□□ 0.05
SSRP1-202ENST00000293880 SERTAD3Q9UJW9 196 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 PROS1P07225 676 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 HOXD8P13378 290 aaPredicted RBP15.36■□□□□ 0.05
SSRP1-202ENST00000293880 PTGER1P34995 402 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 RIDAP52758 137 aaKnown RBP15.36■□□□□ 0.05
SSRP1-202ENST00000293880 SNTB2Q13425 540 aaKnown RBP15.36■□□□□ 0.05
SSRP1-202ENST00000293880 NPY5RQ15761 445 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 ATG9BQ674R7 924 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 ZNF486Q96H40 463 aaPredicted RBP15.36■□□□□ 0.05
SSRP1-202ENST00000293880 CENPOQ9BU64 300 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 KLHL21Q9UJP4 597 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 A0A1W2PQL4 384 aaPredicted RBP15.36■□□□□ 0.05
SSRP1-202ENST00000293880 CBY3A6NI87 242 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 KLK3P07288 261 aaPredicted RBP15.36■□□□□ 0.05
SSRP1-202ENST00000293880 ADH6P28332 368 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 SGSHP51688 502 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 PITX1P78337 314 aaPredicted RBP15.36■□□□□ 0.05
SSRP1-202ENST00000293880 PLEKHN1Q494U1 663 aaPredicted RBP15.36■□□□□ 0.05
SSRP1-202ENST00000293880 DESI1Q6ICB0 168 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 OR4C11Q6IEV9 310 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 SORCS1Q8WY21 1168 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 OR5P2Q8WZ92 322 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 SLC41A3Q96GZ6 507 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 PTGES2Q9H7Z7 377 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 CRTAC1Q9NQ79 661 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 GFOD1Q9NXC2 390 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 RD3LP0DJH9 198 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 TMEM205Q6UW68 189 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 SNIP1Q8TAD8 396 aaKnown RBP15.36■□□□□ 0.05
SSRP1-202ENST00000293880 KCMF1Q9P0J7 381 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 IRS2Q9Y4H2 1338 aa15.36■□□□□ 0.05
SSRP1-202ENST00000293880 FUOMA2VDF0 154 aa15.35■□□□□ 0.05
SSRP1-202ENST00000293880 IFNA1P01562 189 aa15.35■□□□□ 0.05
SSRP1-202ENST00000293880 UCHL1P09936 223 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms