RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 NEFHP12036 1026 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 MPIP34949 423 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 SERPINB4P48594 390 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 KCNJ2P63252 427 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 ADORA2A-AS1P86434 159 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 RFTN2Q52LD8 501 aaPredicted RBP21.09■□□□□ 0.97
LSM4-201ENST00000252816 BICRALQ6AI39 1079 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 IKBIPQ70UQ0 350 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 FAM109AQ8N4B1 249 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 OR7G2Q8NG99 324 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 SPPL2AQ8TCT8 520 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 DIO2Q92813 273 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 LCORQ96JN0 433 aaPredicted RBP21.09■□□□□ 0.97
LSM4-201ENST00000252816 CENPHQ9H3R5 247 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 MIEF1Q9NQG6 463 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 PRODH2Q9UF12 536 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 ZDHHC2Q9UIJ5 367 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 MEMO1Q9Y316 297 aa21.09■□□□□ 0.97
LSM4-201ENST00000252816 TP53I11O14683 189 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 PIP5K1BO14986 540 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 JUNP05412 331 aaKnown RBP21.08■□□□□ 0.97
LSM4-201ENST00000252816 RFPL3SP0C7P2 107 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 SERPINB5P36952 375 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 PPICP45877 212 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 RPL38P63173 70 aaKnown RBP21.08■□□□□ 0.97
LSM4-201ENST00000252816 DESI1Q6ICB0 168 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 ARHGAP11AQ6P4F7 1023 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 C3P1Q6ZMU1 363 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 NCCRP1Q6ZVX7 275 aaPredicted RBP21.08■□□□□ 0.97
LSM4-201ENST00000252816 DDIASQ8IXT1 998 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 FAM9CQ8IZT9 166 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 FAM57AQ8TBR7 257 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 GFM2Q969S9 779 aaKnown RBP21.08■□□□□ 0.97
LSM4-201ENST00000252816 ERP27Q96DN0 273 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 DOHHQ9BU89 302 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 SSU72Q9NP77 194 aaKnown RBP21.08■□□□□ 0.97
LSM4-201ENST00000252816 ZFP64Q9NPA5 681 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 HRH3Q9Y5N1 445 aa21.08■□□□□ 0.97
LSM4-201ENST00000252816 UNC79Q9P2D8 2635 aa21.08■□□□□ 0.96
LSM4-201ENST00000252816 DNAJC13O75165 2243 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 MAST4O15021 2626 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 ATP6AP2A0A1C7CYW4 349 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 WDR91A4D1P6 747 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 ANKRD33BA6NCL7 494 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 PRRG2O14669 202 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 ADAM10O14672 748 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 PLOD3O60568 738 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 PPM1BO75688 479 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 ATP6AP2O75787 350 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 IGHG3P01860 377 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 ABCB1P08183 1280 aaPredicted RBP21.07■□□□□ 0.96
LSM4-201ENST00000252816 ESRRAP11474 423 aaPredicted RBP21.07■□□□□ 0.96
LSM4-201ENST00000252816 SDC1P18827 310 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 DRD5P21918 477 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 TMED10P49755 219 aaKnown RBP21.07■□□□□ 0.96
LSM4-201ENST00000252816 NCBP2P52298 156 aaKnown RBP eCLIP21.07■□□□□ 0.964e-7■□□□□ 8.2
LSM4-201ENST00000252816 MPP2Q14168 576 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 MTFR2Q6P444 385 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 CD163Q86VB7 1156 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 NUDCD3Q8IVD9 361 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 OMA1Q96E52 524 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 HSPBAP1Q96EW2 488 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 CCT7Q99832 543 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 GLIPR2Q9H4G4 154 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 GIMAP2Q9UG22 337 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 BOKQ9UMX3 212 aaPredicted RBP21.07■□□□□ 0.96
LSM4-201ENST00000252816 GPR55Q9Y2T6 319 aaPredicted RBP21.07■□□□□ 0.96
LSM4-201ENST00000252816 NINQ8N4C6 2090 aa21.07■□□□□ 0.96
LSM4-201ENST00000252816 FRG2CA6NGY1 282 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 ACOX3O15254 700 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 TRIM3O75382 744 aaPredicted RBP21.06■□□□□ 0.96
LSM4-201ENST00000252816 BCAS2O75934 225 aaPredicted RBP21.06■□□□□ 0.96
LSM4-201ENST00000252816 TPOP07202 933 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 CT45A8P0DMV1 189 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 CT45A9P0DMV2 189 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 DCAF7P61962 342 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 GALNTL6Q49A17 601 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 CT45A2Q5DJT8 189 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 XKR7Q5GH72 579 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 ANKRD26P1Q6NSI1 321 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 PAOXQ6QHF9 649 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 TRILQ7L0X0 811 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 MRGPRGQ86SM5 289 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 NTNG2Q96CW9 530 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 C3orf30Q96M34 536 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 JSRP1Q96MG2 331 aaPredicted RBP21.06■□□□□ 0.96
LSM4-201ENST00000252816 VSTM2LQ96N03 204 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 AMDHD1Q96NU7 426 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 TSSK3Q96PN8 268 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 BTBD9Q96Q07 612 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 SECISBP2Q96T21 854 aaKnown RBP21.06■□□□□ 0.96
LSM4-201ENST00000252816 ZNF703Q9H7S9 590 aaPredicted RBP21.06■□□□□ 0.96
LSM4-201ENST00000252816 ZNF395Q9H8N7 513 aaPredicted RBP21.06■□□□□ 0.96
LSM4-201ENST00000252816 BAIAP2L1Q9UHR4 511 aa21.06■□□□□ 0.96
LSM4-201ENST00000252816 EXPH5Q8NEV8 1989 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 TO15178 435 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 ITM2AO43736 263 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 LYPLA1O75608 230 aaPredicted RBP21.05■□□□□ 0.96
LSM4-201ENST00000252816 DHRS4L1P0CG22 281 aa21.05■□□□□ 0.96
LSM4-201ENST00000252816 NAGAP17050 411 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms