RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SDK1Q7Z5N4 2213 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 A0A0B4J293 547 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 J3KTA2 159 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 C1QBP02746 253 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 FGF9P31371 208 aaPredicted RBP19.39■□□□□ 0.7
SNX3-201ENST00000230085 NUDT1P36639 197 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 SMIM11AP58511 58 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 TAS2R38P59533 333 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 RIPPLY1Q0D2K3 151 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 COX10Q12887 443 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 TPBGQ13641 420 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.39■□□□□ 0.7
SNX3-201ENST00000230085 SAXO2Q658L1 398 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 REEP3Q6NUK4 255 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 MED27Q6P2C8 311 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 SLCO4C1Q6ZQN7 724 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 ZNF767PQ75MW2 155 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 OR14C36Q8NHC7 312 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 HCAR2Q8TDS4 363 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 FAM131CQ96AQ9 280 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 RNF31Q96EP0 1072 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 TOE1Q96GM8 510 aaKnown RBP19.39■□□□□ 0.7
SNX3-201ENST00000230085 GTPBP2Q9BX10 602 aaKnown RBP19.39■□□□□ 0.7
SNX3-201ENST00000230085 POLR2J2Q9GZM3 115 aaKnown RBP19.39■□□□□ 0.7
SNX3-201ENST00000230085 SNTG1Q9NSN8 517 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 ZSCAN32Q9NX65 697 aa19.39■□□□□ 0.7
SNX3-201ENST00000230085 WSB2Q9NYS7 404 aaPredicted RBP19.39■□□□□ 0.7
SNX3-201ENST00000230085 TMEM129A0AVI4 362 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 TSPAN11A1L157 253 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 H3BM21 787 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 M0R129 80 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 FFAR1O14842 300 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 PLA2G10O15496 165 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 C6orf47O95873 294 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 MSL3P1P0C860 447 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 FAM157BP0CG42 384 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 ZNF30P17039 623 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 PKLRP30613 574 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 SOX3P41225 446 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 EFNB1P98172 346 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 FAPQ12884 760 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 TP53BP2Q13625 1128 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 PLK5Q496M5 336 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 Q5BKY6 102 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 CD200R1LQ6Q8B3 271 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 TAGAPQ8N103 731 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 ZBTB44Q8NCP5 570 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 COQ7Q99807 217 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 BTBD1Q9H0C5 482 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 RANGRFQ9HD47 186 aaPredicted RBP19.39■□□□□ 0.69
SNX3-201ENST00000230085 ABCB9Q9NP78 766 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 MBD1Q9UIS9 605 aaPredicted RBP19.39■□□□□ 0.69
SNX3-201ENST00000230085 TMCC3Q9ULS5 477 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 SNX11Q9Y5W9 270 aa19.39■□□□□ 0.69
SNX3-201ENST00000230085 FABP12A6NFH5 140 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 HRO43593 1189 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 NDUFB5O43674 189 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 CATP04040 527 aaKnown RBP19.38■□□□□ 0.69
SNX3-201ENST00000230085 ALAS2P22557 587 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 UQCRC2P22695 453 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 ADPRHP54922 357 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 P2RX3P56373 397 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 PPP3R1P63098 170 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 TCF15Q12870 199 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 PUM1Q14671 1186 aaKnown RBP eCLIP19.38■□□□□ 0.69
SNX3-201ENST00000230085 QPRTQ15274 297 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 SEC23BQ15437 767 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 SLC5A12Q1EHB4 618 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 MPEG1Q2M385 716 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 CCDC58Q4VC31 144 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 FAM209AQ5JX71 171 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 FAM131AQ6UXB0 335 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 RAVER1Q8IY67 606 aaKnown RBP19.38■□□□□ 0.69
SNX3-201ENST00000230085 SLC34A3Q8N130 599 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 PRSS33Q8NF86 280 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 CDC26Q8NHZ8 85 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 VANGL1Q8TAA9 524 aaPredicted RBP19.38■□□□□ 0.69
SNX3-201ENST00000230085 SKA2Q8WVK7 121 aaPredicted RBP19.38■□□□□ 0.69
SNX3-201ENST00000230085 PPCDCQ96CD2 204 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 TTYH2Q9BSA4 534 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 EFCAB11Q9BUY7 163 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 ANKRA2Q9H9E1 313 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 FGF20Q9NP95 211 aaPredicted RBP19.38■□□□□ 0.69
SNX3-201ENST00000230085 RPRD1BQ9NQG5 326 aaKnown RBP19.38■□□□□ 0.69
SNX3-201ENST00000230085 CLEC2DQ9UHP7 191 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 ITM2BQ9Y287 266 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 GON4LQ3T8J9 2241 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 CACNA1HO95180 2353 aa19.38■□□□□ 0.69
SNX3-201ENST00000230085 GNG14A0A1W2PPG7 69 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 UPK3BL1B0FP48 263 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 UPK3BL2E5RIL1 263 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 PLRG1O43660 514 aaKnown RBP19.37■□□□□ 0.69
SNX3-201ENST00000230085 CKMT1AP12532 417 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 BCKDHBP21953 392 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 ELAVL4P26378 380 aaKnown RBP19.37■□□□□ 0.69
SNX3-201ENST00000230085 KIR2DL3P43628 341 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 POLR2LP62875 67 aaKnown RBP19.37■□□□□ 0.69
SNX3-201ENST00000230085 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.37■□□□□ 0.691e-7■■■■■ 32.6
SNX3-201ENST00000230085 PDZK1Q5T2W1 519 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 LCN1P1Q5VSP4 162 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms