RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FAM124BQ9H5Z6 455 aaPredicted RBP12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 A6NL46 340 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 FAAHO00519 579 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 TGM5O43548 720 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 JUPP14923 745 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 OTX2P32243 289 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 ATG9BQ674R7 924 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 DPY19L4Q7Z388 723 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 FAM86B1Q8N7N1 296 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 RIT1Q92963 219 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 HINT2Q9BX68 163 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 RNF32Q9H0A6 362 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 NXF5Q9H1B4 397 aaKnown RBP12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 STUB1Q9UNE7 303 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 A0A1W2PQL4 384 aaPredicted RBP12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 A6NLC8 198 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 SGK494L7N484 410 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 SMAD6O43541 496 aaKnown RBP12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 SLC19A2O60779 497 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 ADH1BP00325 375 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 KNG1P01042 644 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 GGT1P19440 569 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 RFC2P35250 354 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 GLP1RP43220 463 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 ATP4BP51164 291 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 GPR157Q5UAW9 335 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 ELP2Q6IA86 826 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 ELMOD2Q8IZ81 293 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 SDR9C7Q8NEX9 313 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 SCP2D1Q9UJQ7 156 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 PCTPQ9UKL6 214 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 CARD8Q9Y2G2 431 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 ANKRD12Q6UB98 2062 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 ZNF14P17017 642 aaPredicted RBP12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 HOXA11P31270 313 aaPredicted RBP12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 RPS21P63220 83 aaKnown RBP12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 NTRK2Q16620 822 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 FKBP10Q96AY3 582 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 TREX2Q9BQ50 279 aaPredicted RBP12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 C10orf71Q711Q0 1435 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 PSMB5P28074 263 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 EVI2BP34910 448 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 TMEM31Q5JXX7 168 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 LINC00471Q8N535 108 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 ACOT12Q8WYK0 555 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 FAM46BQ96A09 425 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 PSKH2Q96QS6 385 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 RBP7Q96R05 134 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 FN3KQ9H479 309 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 NMNAT1Q9HAN9 279 aaPredicted RBP12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 EDARQ9UNE0 448 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 NPIPB15A6NHN6 443 aaPredicted RBP12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 OR2B3O76000 313 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 CYP17A1P05093 508 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 TRAM1L1Q8N609 369 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 FOXJ1Q92949 421 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 TESCQ96BS2 214 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 ST6GALNAC5Q9BVH7 336 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 MROQ9BYG7 248 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 CDC14CA4D256 554 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 EMC8O43402 210 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 BRINP1O60477 761 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 MC3RP41968 323 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 AWAT2Q6E213 333 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 Q6ZPB1 254 aaPredicted RBP12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 COMMD7Q86VX2 200 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 KLHDC8AQ8IYD2 350 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 NINJ1Q92982 152 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 C1orf74Q96LT6 269 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 C3orf30Q96M34 536 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 ABCG5Q9H222 651 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 CA5BQ9Y2D0 317 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 EPCAMP16422 314 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 DNASE1P24855 282 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 TMBIM6P55061 237 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 BBS10Q8TAM1 723 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 TRMT10AQ8TBZ6 339 aaKnown RBP12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 SLC41A3Q96GZ6 507 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 PEX12O00623 359 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 GSTT2P0CG29 244 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 SGSHP51688 502 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 NDUFAF5Q5TEU4 345 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 CYP4V2Q6ZWL3 525 aaPredicted RBP12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 COMMD6Q7Z4G1 85 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 ZER1Q7Z7L7 766 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 TMEM125Q96AQ2 219 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 FAM53CQ9NYF3 392 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 SLAMF8Q9P0V8 285 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 POU2F3Q9UKI9 436 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 STYXL1Q9Y6J8 313 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 UBFD1O14562 309 aaKnown RBP12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 RBMXP38159 391 aaKnown RBP12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 CGB2Q6NT52 195 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 ASCC1Q8N9N2 400 aaKnown RBP12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 FAXDC2Q96IV6 333 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 HHIPQ96QV1 700 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 VDAC3Q9Y277 283 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 FAM189A1O60320 539 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 DHCR24Q15392 516 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 ZNF765Q7L2R6 523 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms