RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 VaspP70460 375 aaKnown RBP12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Tfb2mQ3TL26 396 aaKnown RBP12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 P2rx5Q3UYI1 455 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Tmem247Q497K7 211 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Runx1t1Q61909 577 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Ssr4Q62186 172 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Rapgefl1Q68EF8 662 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Ugt2a2Q6PDD0 528 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Ccdc126Q8BIS8 140 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Larp4Q8BWW4 719 aaKnown RBP12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Serpina11Q8CIE0 424 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Vmn1r71Q8VIC0 307 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 As3mtQ91WU5 376 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Olfr103Q920Y8 313 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Fam166aQ9D4K5 319 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Acad8Q9D7B6 413 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Exosc1Q9DAA6 195 aaKnown RBP12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Prl8a8Q9DAS4 241 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Dgat2Q9DCV3 388 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Sertad3Q9ERC3 197 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 ChmlQ9QZD5 621 aa12.02□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Gm13539A0A1B0GSM6 183 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Olfr1032A2ATE5 310 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Rnf39A2RT81 352 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Rem1O35929 297 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Cma1P21844 247 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Id2P41136 134 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Ankdd1bQ14DN9 521 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Cdkn2dQ60773 166 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Eif2s1Q6ZWX6 315 aaKnown RBP12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 PigzQ8BTP0 560 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Cmtr2Q8BWQ4 767 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Gprin3Q8BWS5 763 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Mblac1Q8BWY4 260 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Cyp2u1Q9CX98 530 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Dhrs7Q9CXR1 338 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Spaca1Q9DA48 305 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Pkmyt1Q9ESG9 490 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 TprnA2AI08 749 aaKnown RBP12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Olfr376E9Q4M1 320 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Rhox13F6YCR7 232 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Vmn2r93L7N1Z9 857 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 PnpP23492 289 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Rab12P35283 243 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Itgb8Q0VBD0 767 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Zfp935Q14DI0 353 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Coq8bQ566J8 533 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Slc44a5Q5RJI2 710 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Nr0b2Q62227 260 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Glt28d2Q8BML3 165 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 UstQ8BUB6 407 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Fndc5Q8K4Z2 209 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Foxe1Q8R2I0 371 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Cd276Q8VE98 316 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Abcg5Q99PE8 652 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 HhatlQ9D1G3 503 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Tmem35aQ9D328 167 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Q9D4W2 315 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 PrkraQ9WTX2 313 aaKnown RBP12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Aloxe3Q9WV07 711 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Auts2A0A087WPF7 1261 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Zfp433A0A0J9YUD4 600 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Gm32687A0A1W2P6H7 600 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Cd300ld4A2A7W1 245 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Rnf217D3YYI7 515 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Olfr640E9Q7P5 314 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Vmn1r16K7N775 303 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Hoxd4P10628 250 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 DctP29812 517 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Dhrs11Q3U0B3 260 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Laptm4aQ60961 233 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Ppp3r2Q63811 179 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Znf513Q6PD29 541 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Cd300ld3Q6SJQ5 245 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Znf516Q7TSH3 1157 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Vac14Q80WQ2 782 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Mblac2Q8BL86 279 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Eif4e2Q8BMB3 245 aaKnown RBP12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Fam92aQ8BP22 355 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Colec12Q8K4Q8 742 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Ttc4Q8R3H9 386 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Dus3lQ91XI1 637 aaKnown RBP12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Mrgprb5Q91ZB9 322 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Olfr938Q9EQ93 315 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Rtp4Q9ER80 249 aaKnown RBP12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Serpini2Q9JK88 405 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Tpk1Q9R0M5 243 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Rgs6Q9Z2H2 472 aa12.01□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Gm8251F6VUT6 1994 aa12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Rex2A2AWF2 685 aa12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Rdh8D3Z6W3 317 aa12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Ppt2O35448 302 aa12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 TrhrP21761 393 aa12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 VipP32648 170 aa12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Sox14Q04892 240 aa12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Krt76Q3UV17 594 aaKnown RBP12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 WhammQ571B6 793 aa12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Fam169aQ5XG69 665 aa12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Trim17Q7TPM3 477 aa12□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Cst13Q80ZN5 141 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms