RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 CRLS1Q9UJA2 301 aa-0.5□□□□□ -2.49
LMBR1-222ENST00000638959 IGSF9BQ9UPX0 1349 aa-0.5□□□□□ -2.49
LMBR1-222ENST00000638959 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 TRAV18A0A075B6X5 111 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 GPR75-ASB3A0A0A6YYF3 556 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 FAM149AA5PLN7 773 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 A8MUU9 505 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 TRIM77I1YAP6 450 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 WDR46O15213 610 aaKnown RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 AP5Z1O43299 807 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 PLIN1O60240 522 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 CSO75390 466 aaKnown RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 CDRT1O95170 752 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 DDX58O95786 925 aaKnown RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 H2AFZP0C0S5 128 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 LINGO3P0C6S8 592 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 UQCRFS1P1P0C7P4 283 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 EPORP19235 508 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 PSMA4P25789 261 aaKnown RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 SSTR1P30872 391 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 TIA1P31483 386 aaKnown RBP eCLIP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 CRKLP46109 303 aaKnown RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 RPL27P61353 136 aaKnown RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 SULT2A1Q06520 285 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 ABRQ12979 859 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 DDX10Q13206 875 aaKnown RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 IL15RAQ13261 267 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 SS18Q15532 418 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 LDHAL6AQ6ZMR3 332 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 TMEM135Q86UB9 458 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 OSR2Q8N2R0 312 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 MTURNQ8N3F0 131 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 WDTC1Q8N5D0 677 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 CHDHQ8NE62 594 aaPredicted RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 COL22A1Q8NFW1 1626 aaPredicted RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 SLC26A7Q8TE54 656 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 PTPMT1Q8WUK0 201 aaPredicted RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 BPIFA2Q96DR5 249 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 OTUB1Q96FW1 271 aaPredicted RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 GDAP1L1Q96MZ0 367 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 OR2M2Q96R28 347 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 FEVQ99581 238 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 NDFIP1Q9BT67 221 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 NUSAP1Q9BXS6 441 aaKnown RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 OSGEPL1Q9H4B0 414 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 NOL11Q9H8H0 719 aaKnown RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 COG4Q9H9E3 785 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 IL1RAPL2Q9NP60 686 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 ONECUT1Q9UBC0 465 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 NUFIP1Q9UHK0 495 aaKnown RBP-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 IFT52Q9Y366 437 aa-0.51□□□□□ -2.49
LMBR1-222ENST00000638959 PTGESO14684 152 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 CGB7P0DN87 165 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 IGFBP5P24593 272 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 HSD17B3P37058 310 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 TUBP50607 506 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 GZMMP51124 257 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 APOC4P55056 127 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 FLI1Q01543 452 aaPredicted RBP-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 OTUD4Q01804 1114 aaKnown RBP-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 IL10RBQ08334 325 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 KRT31Q15323 416 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 SNAPC1Q16533 368 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 PIGGQ5H8A4 983 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 SLC10A5Q5PT55 438 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 ZNF684Q5T5D7 378 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 LIPKQ5VXJ0 399 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 MORN3Q6PF18 240 aaPredicted RBP-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 CXCL17Q6UXB2 119 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 IKBIPQ70UQ0 350 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 GDPD3Q7L5L3 318 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 PIWIL3Q7Z3Z3 882 aaKnown RBP-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 PXKQ7Z7A4 578 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 CACUL1Q86Y37 369 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 C9orf40Q8IXQ3 194 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 RFESDQ8TAC1 157 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 GRK7Q8WTQ7 553 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 TCP11Q8WWU5 503 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 FGGYQ96C11 551 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 DNAJC1Q96KC8 554 aaKnown RBP-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 ZNF560Q96MR9 790 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 CARD6Q9BX69 1037 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 LHX5Q9H2C1 402 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 C5orf66Q9H5L9 145 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 ALG9Q9H6U8 611 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 NOX3Q9HBY0 568 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 RETNQ9HD89 108 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 GEMIN8Q9NWZ8 242 aaKnown RBP-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 TBC1D7Q9P0N9 293 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 C6orf203Q9P0P8 240 aaPredicted RBP-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 CDH9Q9ULB4 789 aa-0.52□□□□□ -2.49
LMBR1-222ENST00000638959 LOC102723996A0A087X1L8 192 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 C2orf92A0A1B0GVN3 265 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 PRC1O43663 620 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 IGLV6-57P01721 117 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 ATP5BP06576 529 aaKnown RBP-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 WNT2P09544 360 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 GLULP15104 373 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 CYP11B2P19099 503 aa-0.53□□□□□ -2.49
LMBR1-222ENST00000638959 AZGP1P25311 298 aaKnown RBP-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms