RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 DRD5P21918 477 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 SOX3P41225 446 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 PPICP45877 212 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 MRPS22P82650 360 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 RBPJQ06330 500 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 MLC1Q15049 377 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNHIT3Q15649 155 aaPredicted RBP12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 PDCD2Q16342 344 aaPredicted RBP12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 DPY19L1Q2PZI1 675 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 GALNTL5Q7Z4T8 443 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 MMP21Q8N119 569 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNF441Q8N8Z8 693 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 C16orf52Q8NHV5 167 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 PIWIL2Q8TC59 973 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 LRRC8CQ8TDW0 803 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 UCN3Q969E3 161 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 ARL8AQ96BM9 186 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 LCORQ96JN0 433 aaPredicted RBP12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 TSSK3Q96PN8 268 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 CLMPQ9H6B4 373 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 MEAF6Q9HAF1 191 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 KLHL1Q9NR64 748 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 SACM1LQ9NTJ5 587 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 DDX18Q9NVP1 670 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 ATP6V1HQ9UI12 483 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 FRG2CA6NGY1 282 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 HRKO00198 91 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 SCAMP2O15127 329 aaKnown RBP12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 OR6B1O95007 311 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 CLPSP04118 112 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 CT62P0C5K7 136 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNF24P17028 368 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 LBPP18428 481 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 S1PR1P21453 382 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 GPX3P22352 226 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 TACR1P25103 407 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 PPP2R2AP63151 447 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 ALDH6A1Q02252 535 aaKnown RBP12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 MGAT2Q10469 447 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 RPS6KA2Q15349 733 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNF791Q3KP31 576 aaPredicted RBP12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 LSM12Q3MHD2 195 aaKnown RBP12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 HSP90B2PQ58FF3 399 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNF468Q5VIY5 522 aaPredicted RBP12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 IL23RQ5VWK5 629 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 SLC22A10Q63ZE4 541 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 OGFOD2Q6N063 350 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 IL20RBQ6UXL0 311 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 SPATA19Q7Z5L4 167 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 LIX1Q8N485 282 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 OR52R1Q8NGF1 315 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 OR9A2Q8NGT5 310 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 CEP70Q8NHQ1 597 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 ADIPOR1Q96A54 375 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 EGLN2Q96KS0 407 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 C7orf26Q96N11 449 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 FRMD6Q96NE9 622 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 AMDHD1Q96NU7 426 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 BTBD9Q96Q07 612 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 FAM173AQ9BQD7 235 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 C3orf14Q9HBI5 128 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 HHATLQ9HCP6 504 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 NEUROD4Q9HD90 331 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 INTS9Q9NV88 658 aaKnown RBP12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 SH3BP4Q9P0V3 963 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 MRTO4Q9UKD2 239 aaKnown RBP12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 NPFFR2Q9Y5X5 522 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 MYO18BQ8IUG5 2567 aa12.94□□□□□ -0.34
SNRPA1-216ENST00000626000 SHANK1Q9Y566 2161 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 A0A1W2PS29 197 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 ANKRD33BA6NCL7 494 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 ANKUB1A6NFN9 424 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 TO15178 435 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 PEX1O43933 1283 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 CBX7O95931 251 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 JUNP05412 331 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 CNR1P21554 472 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 GPC1P35052 558 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 KRT20P35900 424 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 FRKP42685 505 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 NR0B1P51843 470 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 CLNS1AP54105 237 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 MANFP55145 182 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 CLDN8P56748 225 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 PRR5P85299 388 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 OCRLQ01968 901 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 NTRK2Q16620 822 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNF750Q32MQ0 723 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 VPS26BQ4G0F5 336 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 PRR30Q53SZ7 412 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 TTMPQ5BVD1 217 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 COLEC12Q5KU26 742 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 CPTPQ5TA50 214 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNF324BQ6AW86 544 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 FAM111BQ6SJ93 734 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 CAMKMTQ7Z624 323 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 ZNF227Q86WZ6 799 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 WDR75Q8IWA0 830 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 OR2L13Q8N349 312 aa12.93□□□□□ -0.34
SNRPA1-216ENST00000626000 FBXW8Q8N3Y1 598 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms