RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SCRG1O75711 98 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ACPPP15309 386 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 C6orf136Q5SQH8 315 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ZNF782Q6ZMW2 699 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PDZD3Q86UT5 571 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 GID4Q8IVV7 300 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PROKR1Q8TCW9 393 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ELP5Q8TE02 316 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ISOC1Q96CN7 298 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ZBED3Q96IU2 234 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 EHD1Q9H4M9 534 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ATXN7L1Q9ULK2 861 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 SLC16A8O95907 504 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 CD36P16671 472 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 FUT4P22083 530 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 IL32P24001 234 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 HSD17B7P56937 341 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PHC1P78364 1004 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 C6orf132Q5T0Z8 1188 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 CES4AQ5XG92 561 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 OPN5Q6U736 354 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 LANCL3Q6ZV70 420 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 SCD5Q86SK9 330 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ZSWIM9Q86XI8 627 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 SLITRK4Q8IW52 837 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 SPPL3Q8TCT6 385 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 THAP4Q8WY91 577 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 MUCL1Q96DR8 90 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 DTD2Q96FN9 168 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 TMEM68Q96MH6 324 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 TMED9Q9BVK6 235 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 SRA1Q9HD15 236 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 KCNIP1Q9NZI2 227 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 TAAR2Q9P1P5 351 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ACTR3BQ9P1U1 418 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PKD1L3Q7Z443 1732 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 PLSCR5A0PG75 271 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 OR14I1A6ND48 311 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 HTRA2O43464 458 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 F3P13726 295 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 MVKQ03426 396 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 TAP2Q03519 686 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 LRFN4Q6PJG9 635 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 CBARPQ8N350 705 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 OR2T33Q8NG76 320 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 OR8H1Q8NGG4 311 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 FNDC8Q8TC99 324 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 HOXB13Q92826 284 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 GCDHQ92947 438 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 ZNF559Q9BR84 538 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 RBM24Q9BX46 236 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 CLEC4EQ9ULY5 219 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 CAMK2AQ9UQM7 478 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 MYH8P13535 1937 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 H3BNC9 293 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 E2F3O00716 465 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 DIRAS1O95057 198 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 CD79AP11912 226 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 MYOGP15173 224 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 POU3F4P49335 361 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 OR5B2Q96R09 309 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 DNTTIP1Q9H147 329 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 TMEM185BQ9H7F4 350 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 OR6C2Q9NZP2 312 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 ADAMTS6Q9UKP5 1117 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 SOCS2O14508 198 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 SIGLEC6O43699 453 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 FMO6PO60774 539 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 ZFAND5O76080 213 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 SCGB1D2O95969 90 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 PLATP00750 562 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 EEF1A2Q05639 463 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 NDUFAF5Q5TEU4 345 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 PRAMEF8Q5VWM4 474 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 PRAMEF7Q5VXH5 474 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 ZNF773Q6PK81 442 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 C15orf39Q6ZRI6 1047 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 TMEM203Q969S6 136 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 TMBIM1Q969X1 311 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 BORCS6Q96GS4 357 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 MSLNLQ96KJ4 702 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 ZNF696Q9H7X3 374 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 ABCD2Q9UBJ2 740 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 SGK494L7N484 410 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 MPPED1O15442 326 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 SMAD6O43541 496 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 RFPL1O75677 317 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 F8A1P23610 371 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 CSNK2A1P68400 391 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 TLE3Q04726 772 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 LIPIQ6XZB0 460 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 CHCHD4Q8N4Q1 142 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 OR52E1Q8NGJ3 308 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 OR9I1Q8NGQ6 314 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 PPP1R35Q8TAP8 253 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 DMRTB1Q96MA1 342 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 TRPV4Q9HBA0 871 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 DNAJC27Q9NZQ0 273 aa9.31□□□□□ -0.92
CLTCL1-211ENST00000621271 EMC3Q9P0I2 261 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms