RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 FAUP35544 74 aaKnown RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 SPAM1P38567 509 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 AKR1C3P42330 323 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 RPS10P46783 165 aaKnown RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 OMPP47874 163 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 WNT7BP56706 349 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 IL2P60568 153 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 RPS27AP62979 156 aaKnown RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 UBA52P62987 128 aaKnown RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 VLDLRP98155 873 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 SORDQ00796 357 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 AIMP2Q13155 320 aaKnown RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 SERTAD2Q14140 314 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 HLXQ14774 488 aaPredicted RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 SLC5A12Q1EHB4 618 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 SPIN4Q56A73 249 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 OR5M10Q6IEU7 315 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 C8orf82Q6P1X6 216 aaPredicted RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 QSOX2Q6ZRP7 698 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 MSANTD1Q6ZTZ1 278 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 UBXN10Q96LJ8 280 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 CCDC74BQ96LY2 380 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 DPH2Q9BQC3 489 aaPredicted RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 POLR2J3Q9H1A7 115 aaKnown RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 WDCPQ9H6R7 721 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 ZNF408Q9H9D4 720 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 ZNF302Q9NR11 478 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 TMPRSS4Q9NRS4 437 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 TMEM248Q9NWD8 314 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 PPP1R14DQ9NXH3 145 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 CCNL1Q9UK58 526 aaPredicted RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 RUVBL1Q9Y265 456 aaKnown RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 MAGEB17A8MXT2 336 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 OR7A17O14581 309 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 TNFRSF10BO14763 440 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 PRKYO43930 277 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 GPR37L1O60883 481 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 ECI2O75521 394 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 TMEM11P17152 192 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 CCR7P32248 378 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 EFNA5P52803 228 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 CTSCP53634 463 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 HCCSP53701 268 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 PRR5P85299 388 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 CAMK2DQ13557 499 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 DGKZQ13574 1117 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 KIAA0141Q14154 515 aaPredicted RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 TMEM132DQ14C87 1099 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 C12orf40Q86WS4 652 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 NUDT13Q86X67 352 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 CERS5Q8N5B7 392 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 GMCL1P1Q8NEA9 526 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 TMEM163Q8TC26 289 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 CPNE4Q96A23 557 aaPredicted RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 L3HYPDHQ96EM0 354 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 LRR1Q96L50 414 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 MRGPRX2Q96LB1 330 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 OR2M4Q96R27 311 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 P2RX7Q99572 595 aaKnown RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 C11orf49Q9H6J7 331 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 IPPKQ9H8X2 491 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 ATP13A1Q9HD20 1204 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 CNOT2Q9NZN8 540 aaKnown RBP7.04□□□□□ -1.28
PDE6A-205ENST00000617647 DMRT1Q9Y5R6 373 aa7.04□□□□□ -1.28
PDE6A-205ENST00000617647 GRXCR2A6NFK2 248 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 PRAF2O60831 178 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 PIRTP0C851 137 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 GPX4P36969 197 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 LUMP51884 338 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 MLLT11Q13015 90 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 ARHGEF7Q14155 803 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 PTGES3Q15185 160 aaKnown RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 ST3GAL2Q16842 350 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 ODF4Q2M2E3 257 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 GLYR1Q49A26 553 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 ZNF789Q5FWF6 425 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 PTRHD1Q6GMV3 140 aaKnown RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 LAIR1Q6GTX8 287 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 KIAA0930Q6ICG6 404 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 MAMDC2Q7Z304 686 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 C2CD4AQ8NCU7 369 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 NLGN2Q8NFZ4 835 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 MRPS24Q96EL2 167 aaKnown RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 LINGO1Q96FE5 620 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 MIXL1Q9H2W2 232 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 EQTNQ9NQ60 294 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 CA14Q9ULX7 337 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 MPTX1A8MV57 137 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 RTCAO00442 366 aaKnown RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 FZD7O75084 574 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 AKR7A3O95154 331 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 CXCL14O95715 111 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 HOXB8P17481 243 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 PRDX3P30048 256 aaKnown RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 BDKRB1P46663 353 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 EVX1P49640 407 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 CRISP1P54107 249 aa7.03□□□□□ -1.28
PDE6A-205ENST00000617647 RPS14P62263 151 aaKnown RBP7.03□□□□□ -1.28
PDE6A-205ENST00000617647 ACY1Q03154 408 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms