RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 VPS33AQ96AX1 596 aa20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 ABHD17AQ96GS6 310 aa20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 SAR1AQ9NR31 198 aa20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 MRGBPQ9NV56 204 aa20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 TAS2R9Q9NYW1 312 aa20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 STMN3Q9NZ72 180 aa20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 PRODH2Q9UF12 536 aa20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 C19orf53Q9UNZ5 99 aaPredicted RBP20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 CFL2Q9Y281 166 aa20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 PCDHGA9Q9Y5G4 932 aaKnown RBP20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 USP24Q9UPU5 2620 aa20.53■□□□□ 0.88
CHMP2A-204ENST00000597848 C2orf92A0A1B0GVN3 265 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 CCDC154A6NI56 674 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 UPK1AO00322 258 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 EMC8O43402 210 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 CCDC22O60826 627 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 COQ9O75208 318 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 SOAT1P35610 550 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 HBA1P69905 142 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 DUSP8Q13202 625 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 KCNAB2Q13303 367 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 UBAP2LQ14157 1087 aaKnown RBP20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 MEP1AQ16819 746 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 ACER2Q5QJU3 275 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 PIGWQ7Z7B1 504 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 OR2L13Q8N349 312 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 SPDL1Q96EA4 605 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 CXorf36Q9H7Y0 433 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 RMND5AQ9H871 391 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 NEUROD4Q9HD90 331 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 BTNL2Q9UIR0 455 aa20.52■□□□□ 0.88
CHMP2A-204ENST00000597848 WWP2O00308 870 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 FCHO1O14526 889 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 MAN1A2O60476 641 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 NME6O75414 186 aaPredicted RBP20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 FAM107AO95990 144 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 SOX11P35716 441 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 CCT3P49368 545 aaKnown RBP20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 EMDP50402 254 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 MLF1P58340 268 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 PRR5P85299 388 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 LRRC74AQ0VAA2 488 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 MAPKAPK3Q16644 382 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 VPS26BQ4G0F5 336 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 C16orf47Q6ZP98 133 aaPredicted RBP20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 GK5Q6ZS86 529 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 NUP43Q8NFH3 380 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 NUBPLQ8TB37 319 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 CCDC115Q96NT0 180 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 PANX1Q96RD7 426 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 NMUR2Q9GZQ4 415 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 WWTR1Q9GZV5 400 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 ADNPQ9H2P0 1102 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 SIRT3Q9NTG7 399 aaPredicted RBP20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 ZCCHC3Q9NUD5 404 aaKnown RBP20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 ABI3Q9P2A4 366 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 MYOTQ9UBF9 498 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 LHX6Q9UPM6 363 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 ARL2BPQ9Y2Y0 163 aa20.51■□□□□ 0.87
CHMP2A-204ENST00000597848 IFI6P09912 130 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 ZNF155Q12901 538 aaPredicted RBP20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 KLF10Q13118 480 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 MFAP5Q13361 173 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 RCAN2Q14206 197 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 EBPQ15125 230 aaKnown RBP20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 MSANTD1Q6ZTZ1 278 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 MTDHQ86UE4 582 aaKnown RBP20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 LGI4Q8N135 537 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 PSMA8Q8TAA3 256 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 FAM120BQ96EK7 910 aaKnown RBP20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 ITCHQ96J02 903 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 LMF1Q96S06 567 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 SMAD5Q99717 465 aaKnown RBP20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 NPAS2Q99743 824 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 INPP5KQ9BT40 448 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 EPS8L2Q9H6S3 715 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 EQTNQ9NQ60 294 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 HEMK1Q9Y5R4 338 aaPredicted RBP20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 ZFHX4Q86UP3 3567 aa20.5■□□□□ 0.87
CHMP2A-204ENST00000597848 TMEM200CA6NKL6 621 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 ERVH48-1M5A8F1 160 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 OR2J2O76002 312 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 CD1EP15812 388 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 ST13P50502 369 aaKnown RBP20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 C6orf10Q5SRN2 563 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 GKAP1Q5VSY0 366 aaPredicted RBP20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 SLC2A7Q6PXP3 512 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 TMEM64Q6YI46 380 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 ZNF621Q6ZSS3 439 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 BEST3Q8N1M1 668 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 OR56A1Q8NGH5 318 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 OR5AK3PQ8NH89 298 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 C9orf43Q8TAL5 461 aaPredicted RBP20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 ITPAQ9BY32 194 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 FOLH1BQ9HBA9 442 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 ARMCX1Q9P291 453 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 TUBD1Q9UJT1 453 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 DTX4Q9Y2E6 619 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 YARS2Q9Y2Z4 477 aaKnown RBP20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 ZNF451Q9Y4E5 1061 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms