RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SIMC1Q8NDZ2 872 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 NFKBIDQ8NI38 313 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 MIPOL1Q8TD10 442 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 RAB8BQ92930 207 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 C16orf58Q96GQ5 468 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 CENPNQ96H22 339 aaPredicted RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 NAF1Q96HR8 494 aaKnown RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 PYURFQ96I23 114 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 CTRCQ99895 268 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 YIPF4Q9BSR8 244 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 NECTIN3Q9NQS3 549 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 SLC22A11Q9NSA0 550 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 CNOT11Q9UKZ1 510 aaKnown RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 A0A087WV62 115 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 POLR1CO15160 346 aaPredicted RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 PLOD3O60568 738 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 GCM2O75603 506 aaPredicted RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 ZNF682O95780 498 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 LDLRP01130 860 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 IFI6P09912 130 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 OR12D1P0DN82 309 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 KHKP50053 298 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 AQP4P55087 323 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 INSM1Q01101 510 aaPredicted RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 MC2RQ01718 297 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 ATP6AP1Q15904 470 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 GALNT10Q86SR1 603 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 PIP4P1Q86T03 277 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 SLC30A8Q8IWU4 369 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 FAM86B1Q8N7N1 296 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 OR5D16Q8NGK9 328 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 CTHRC1Q96CG8 243 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 CLIP3Q96DZ5 547 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 MS4A4EQ96PG1 132 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 CXorf21Q9HAI6 301 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 A4GALTQ9NPC4 353 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 MKKSQ9NPJ1 570 aaPredicted RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 EQTNQ9NQ60 294 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 C19orf53Q9UNZ5 99 aaPredicted RBP14.2□□□□□ -0.14
VRK3-207ENST00000594092 MMACHCQ9Y4U1 282 aa14.2□□□□□ -0.14
VRK3-207ENST00000594092 FAM149AA5PLN7 773 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 NME6O75414 186 aaPredicted RBP14.19□□□□□ -0.14
VRK3-207ENST00000594092 MT-ND1P03886 318 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 HBQ1P09105 142 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.19□□□□□ -0.14
VRK3-207ENST00000594092 VWA2Q5GFL6 755 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 INTS11Q5TA45 600 aaKnown RBP14.19□□□□□ -0.14
VRK3-207ENST00000594092 STPG1Q5TH74 334 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 ZNF385CQ66K41 422 aaPredicted RBP14.19□□□□□ -0.14
VRK3-207ENST00000594092 QSOX2Q6ZRP7 698 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 SLC38A5Q8WUX1 472 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 XAGE5Q8WWM1 108 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 OTUB1Q96FW1 271 aaPredicted RBP14.19□□□□□ -0.14
VRK3-207ENST00000594092 RBM18Q96H35 190 aaKnown RBP14.19□□□□□ -0.14
VRK3-207ENST00000594092 PTCHD1Q96NR3 888 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 DGAT2Q96PD7 388 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 BDH2Q9BUT1 245 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 FBXO8Q9NRD0 319 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 THUMPD1Q9NXG2 353 aaKnown RBP14.19□□□□□ -0.14
VRK3-207ENST00000594092 TOR4AQ9NXH8 423 aa14.19□□□□□ -0.14
VRK3-207ENST00000594092 PRAMEF27A3QJZ7 478 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 DEAF1O75398 565 aaPredicted RBP14.18□□□□□ -0.14
VRK3-207ENST00000594092 TFPTP0C1Z6 253 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 AQP1P29972 269 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 STT3AP46977 705 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 MAN2A2P49641 1150 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 ANXA11P50995 505 aaKnown RBP14.18□□□□□ -0.14
VRK3-207ENST00000594092 CRYBA2P53672 197 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 MAP4K2Q12851 820 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 SERTAD2Q14140 314 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 MYBPC3Q14896 1274 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 MAPK11Q15759 364 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 MINDY4Q4G0A6 757 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 NKAIN1Q4KMZ8 207 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 MFSD4BQ5TF39 518 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 CDCP2Q5VXM1 449 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 MFSD12Q6NUT3 480 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 CBLL1Q75N03 491 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 EIF3MQ7L2H7 374 aaKnown RBP14.18□□□□□ -0.14
VRK3-207ENST00000594092 GALNT12Q8IXK2 581 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 LGI4Q8N135 537 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 VWA5B2Q8N398 1253 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 ZNF570Q96NI8 536 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 CIB1Q99828 191 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 ACTRT3Q9BYD9 372 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 ADPRHL2Q9NX46 363 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 CTSFQ9UBX1 484 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 ANGPT4Q9Y264 503 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 LRCH1Q9Y2L9 728 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 PCDHGA1Q9Y5H4 931 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 KIF26BQ2KJY2 2108 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 NUP210LQ5VU65 1888 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 IGKV3D-11A0A0A0MRZ8 115 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 CLOCKO15516 846 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 ONECUT2O95948 504 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 BCHEP06276 602 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 S1PR1P21453 382 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 RORAP35398 523 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 EFNA3P52797 238 aa14.18□□□□□ -0.14
VRK3-207ENST00000594092 CLDN6P56747 220 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms