RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 SLC10A1Q14973 349 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 ARL13AQ5H913 290 aaPredicted RBP11.13□□□□□ -0.63
TPM4-212ENST00000590180 NOXRED1Q6NXP6 359 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 MRGPRGQ86SM5 289 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 DOLPP1Q86YN1 238 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 TICAM1Q8IUC6 712 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 DND1Q8IYX4 353 aaKnown RBP11.13□□□□□ -0.63
TPM4-212ENST00000590180 PRR22Q8IZ63 422 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 CLYBLQ8N0X4 340 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 ZNF441Q8N8Z8 693 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 OR10G3Q8NGC4 313 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 OR52R1Q8NGF1 315 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 PPP1R14CQ8TAE6 165 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 FAM76AQ8TAV0 307 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 PAQR8Q8TEZ7 354 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 DIO2Q92813 273 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 KAT2AQ92830 837 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 ADIPOR1Q96A54 375 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 C11orf24Q96F05 449 aaPredicted RBP11.13□□□□□ -0.63
TPM4-212ENST00000590180 TTTY12Q9BZ98 90 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 EXO5Q9H790 373 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 LRTM1Q9HBL6 345 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 MIEF1Q9NQG6 463 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 RYDENQ9NUL5 291 aaKnown RBP11.13□□□□□ -0.63
TPM4-212ENST00000590180 C1orf109Q9NX04 203 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 CNIH4Q9P003 139 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 PRODH2Q9UF12 536 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 WBP11Q9Y2W2 641 aaKnown RBP11.13□□□□□ -0.63
TPM4-212ENST00000590180 TRAF6Q9Y4K3 522 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 PTGDR2Q9Y5Y4 395 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 DNAJC13O75165 2243 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 ZNF407Q9C0G0 2248 aa11.13□□□□□ -0.63
TPM4-212ENST00000590180 UTP20O75691 2785 aaKnown RBP11.13□□□□□ -0.63
TPM4-212ENST00000590180 EML6Q6ZMW3 1958 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 WDR91A4D1P6 747 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 BCAS2O75934 225 aaPredicted RBP11.12□□□□□ -0.63
TPM4-212ENST00000590180 CHRNGP07510 517 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 DDCP20711 480 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 GPX3P22352 226 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 FBXW4P57775 412 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 ZNF844Q08AG5 666 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 NNATQ16517 81 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 NTRK2Q16620 822 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 CEP85LQ5SZL2 805 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 TMEM198Q66K66 360 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 FAM71E1Q6IPT2 247 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 ARHGAP11AQ6P4F7 1023 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 C3P1Q6ZMU1 363 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 Q6ZPB1 254 aaPredicted RBP11.12□□□□□ -0.63
TPM4-212ENST00000590180 Q6ZSR9 355 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 ZCCHC23Q6ZST2 131 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 FGD2Q7Z6J4 655 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 NUDCD3Q8IVD9 361 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 HOMEZQ8IX15 550 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 DDIASQ8IXT1 998 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 FBXW8Q8N3Y1 598 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 TMEM251Q8N6I4 163 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 SIMC1Q8NDZ2 872 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 OR9A2Q8NGT5 310 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 AGR3Q8TD06 166 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 CTHRC1Q96CG8 243 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 CCDC120Q96HB5 630 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 LCORQ96JN0 433 aaPredicted RBP11.12□□□□□ -0.63
TPM4-212ENST00000590180 ITPAQ9BY32 194 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 NXF5Q9H1B4 397 aaKnown RBP11.12□□□□□ -0.63
TPM4-212ENST00000590180 LDAHQ9H6V9 325 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 ANKRA2Q9H9E1 313 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 SH2D2AQ9NP31 389 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 EHD3Q9NZN3 535 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 SENP1Q9P0U3 644 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 ZNF639Q9UID6 485 aa11.12□□□□□ -0.63
TPM4-212ENST00000590180 BOKQ9UMX3 212 aaPredicted RBP11.12□□□□□ -0.63
TPM4-212ENST00000590180 NPIPA2E9PIF3 369 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 NPIPA3F8WFD2 350 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 GLSO94925 669 aaPredicted RBP11.11□□□□□ -0.63
TPM4-212ENST00000590180 CBX7O95931 251 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 JUNP05412 331 aaKnown RBP11.11□□□□□ -0.63
TPM4-212ENST00000590180 BPGMP07738 259 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 FGF4P08620 206 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 MAGEA5P43359 124 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 PPICP45877 212 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 TMED10P49755 219 aaKnown RBP11.11□□□□□ -0.63
TPM4-212ENST00000590180 EMDP50402 254 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 NCBP2P52298 156 aaKnown RBP eCLIP11.11□□□□□ -0.63
TPM4-212ENST00000590180 SMSP52788 366 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 DCAF7P61962 342 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 RPP38P78345 283 aaKnown RBP11.11□□□□□ -0.63
TPM4-212ENST00000590180 FOXO1Q12778 655 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 DUSP8Q13202 625 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 KIAA0040Q15053 153 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 RPS6KA2Q15349 733 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 PRSS53Q2L4Q9 553 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 GALNTL6Q49A17 601 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 ZNF628Q5EBL2 1059 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 SH2D4BQ5SQS7 431 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 KANK2Q63ZY3 851 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 CHERPQ8IWX8 916 aaKnown RBP11.11□□□□□ -0.63
TPM4-212ENST00000590180 FAM9CQ8IZT9 166 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 EID3Q8N140 333 aa11.11□□□□□ -0.63
TPM4-212ENST00000590180 FAM109AQ8N4B1 249 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms