RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 APOFQ13790 326 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 SIM2Q14190 667 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-206ENST00000588860 GNA13Q14344 377 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 LASP1Q14847 261 aaKnown RBP8.23□□□□□ -1.09
SMAD4-206ENST00000588860 MAPK11Q15759 364 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 RFX4Q33E94 735 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 KCTD21Q4G0X4 260 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 GPAT3Q53EU6 434 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 RNF220Q5VTB9 566 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 TTC23Q5W5X9 447 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 OGFOD3Q6PK18 319 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 TSEN54Q7Z6J9 526 aaKnown RBP8.23□□□□□ -1.09
SMAD4-206ENST00000588860 KRT73Q86Y46 540 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 LGI4Q8N135 537 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 DNAJC22Q8N4W6 341 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 METTL25Q8N6Q8 603 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 ATG16L2Q8NAA4 619 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 TSPAN14Q8NG11 270 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 OR9A4Q8NGU2 314 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 BBS10Q8TAM1 723 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 MIPOL1Q8TD10 442 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 PROX1Q92786 737 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 TCTN2Q96GX1 697 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 COL21A1Q96P44 957 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 MS4A4EQ96PG1 132 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 OR7D2Q96RA2 312 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 ZNF300Q96RE9 604 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-206ENST00000588860 NPLQ9BXD5 320 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-206ENST00000588860 AMBRA1Q9C0C7 1298 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 FAM192AQ9GZU8 254 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 ANKRA2Q9H9E1 313 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 CLK4Q9HAZ1 481 aaKnown RBP8.23□□□□□ -1.09
SMAD4-206ENST00000588860 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 DDX18Q9NVP1 670 aaKnown RBP8.23□□□□□ -1.09
SMAD4-206ENST00000588860 FAM118AQ9NWS6 357 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 IRAK4Q9NWZ3 460 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 SOHLH2Q9NX45 425 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 DLL3Q9NYJ7 618 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 TMEFF2Q9UIK5 374 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-206ENST00000588860 C3orf18Q9UK00 162 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 CLCA2Q9UQC9 943 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 SH3GLB1Q9Y371 365 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 FAM32AQ9Y421 112 aaKnown RBP8.23□□□□□ -1.09
SMAD4-206ENST00000588860 PCDHGB3Q9Y5G1 929 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 ASXL3Q9C0F0 2248 aa8.23□□□□□ -1.09
SMAD4-206ENST00000588860 FAM208BQ5VWN6 2430 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 CEP250Q9BV73 2442 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 CABIN1Q9Y6J0 2220 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 SETXQ7Z333 2677 aaKnown RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 PRAMEF27A3QJZ7 478 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 TLCD2A6NGC4 264 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 PRAMEF25A6NGN4 478 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 FAM227AF5H4B4 570 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 J3KTA2 159 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 BCKDKO14874 412 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 FGF17O60258 216 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 LDB3O75112 727 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 SERPINB7O75635 380 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 DNAJB5O75953 348 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 MFN2O95140 757 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 CLPTM1O96005 669 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 PDGFBP01127 241 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 CHRM4P08173 479 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 ITGAMP11215 1152 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 CYP4B1P13584 511 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 PORP16435 677 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 CDH2P19022 906 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 NT5EP21589 574 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 PIGAP37287 484 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 XCR1P46094 333 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 DHPSP49366 369 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 DAPP51397 102 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 CRISP3P54108 245 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 EPHA4P54764 986 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 CDH15P55291 814 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 OR1D5P58170 312 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 FUT5Q11128 374 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 NDUFA9Q16795 377 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 EXOC3L2Q2M3D2 409 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 PRTGQ2VWP7 1150 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 ATAD3BQ5T9A4 648 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 NKAIN2Q5VXU1 208 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 LYSMD4Q5XG99 296 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 CWF19L1Q69YN2 538 aaKnown RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 FAM111BQ6SJ93 734 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 USP53Q70EK8 1073 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 OLIG3Q7RTU3 272 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 C16orf62Q7Z3J2 963 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 CYP4Z1Q86W10 505 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 C8orf59Q8N0T1 100 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 TTC29Q8NA56 475 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 TMEM52Q8NDY8 209 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 OR7G2Q8NG99 324 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 GPR32P1Q8NGA4 272 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 OR4C15Q8NGM1 316 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 VANGL1Q8TAA9 524 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-206ENST00000588860 GIPC3Q8TF64 312 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 RASSF5Q8WWW0 418 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 NCSTNQ92542 709 aa8.22□□□□□ -1.09
SMAD4-206ENST00000588860 TANKQ92844 425 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms