RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 BAIAP2L1Q9UHR4 511 aa9.19□□□□□ -0.94
GGA3-209ENST00000580646 ZNF639Q9UID6 485 aa9.19□□□□□ -0.94
GGA3-209ENST00000580646 GPR45Q9Y5Y3 372 aa9.19□□□□□ -0.94
GGA3-209ENST00000580646 PRRC2CQ9Y520 2896 aaKnown RBP9.18□□□□□ -0.94
GGA3-209ENST00000580646 A0A087WV62 115 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 GOLGA8QA0A0J9YX86 632 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 DYTNA2CJ06 578 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 GOLGA8OA6NCC3 632 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 GABRR3A8MPY1 467 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 GOLGA8NF8WBI6 632 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 PLOD2O00469 737 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 PDPK1O15530 556 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 PLOD3O60568 738 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 DIAPH2O60879 1101 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 AGFG2O95081 481 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 TROVE2P10155 538 aaKnown RBP eCLIP9.18□□□□□ -0.94
GGA3-209ENST00000580646 IDH3AP50213 366 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 AQP5P55064 265 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 SRSF11Q05519 484 aaKnown RBP9.18□□□□□ -0.94
GGA3-209ENST00000580646 MGAT2Q10469 447 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 LSM12Q3MHD2 195 aaKnown RBP9.18□□□□□ -0.94
GGA3-209ENST00000580646 ZNF628Q5EBL2 1059 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 ABHD17BQ5VST6 288 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 METTL21CQ5VZV1 264 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 DGAT2L6Q6ZPD8 337 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 VWA5B2Q8N398 1253 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 SLC5A8Q8N695 610 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 C17orf47Q8NEP4 570 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 OR8J2Q8NGG1 315 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 NUBPLQ8TB37 319 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 PRR7Q8TB68 274 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 NCLNQ969V3 563 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 EXOSC8Q96B26 276 aaKnown RBP9.18□□□□□ -0.94
GGA3-209ENST00000580646 PPWD1Q96BP3 646 aaKnown RBP9.18□□□□□ -0.94
GGA3-209ENST00000580646 ZBED6CLQ96FA7 236 aaPredicted RBP9.18□□□□□ -0.94
GGA3-209ENST00000580646 SENP5Q96HI0 755 aaPredicted RBP9.18□□□□□ -0.94
GGA3-209ENST00000580646 ZNF354BQ96LW1 612 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 PSMG3-AS1Q96PY0 264 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 OR52B2Q96RD2 323 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 BBS4Q96RK4 519 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 DPY30Q9C005 99 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 KCNK13Q9HB14 408 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 SDR39U1Q9NRG7 319 aaPredicted RBP9.18□□□□□ -0.94
GGA3-209ENST00000580646 MRGBPQ9NV56 204 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 CHCHD3Q9NX63 227 aaKnown RBP9.18□□□□□ -0.94
GGA3-209ENST00000580646 MAT2BQ9NZL9 334 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 ZIM2Q9NZV7 527 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 TEKT2Q9UIF3 430 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 ZNF223Q9UK11 482 aaPredicted RBP9.18□□□□□ -0.94
GGA3-209ENST00000580646 CFL2Q9Y281 166 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 SHANK1Q9Y566 2161 aa9.18□□□□□ -0.94
GGA3-209ENST00000580646 TRAV17A0A0B4J275 112 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 TRBV11-1A0A0K0K1C0 115 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 A0A1W2PS29 197 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 ANKUB1A6NFN9 424 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 A8MUA0 341 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 A8MUI8 341 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 EBAG9O00559 213 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 UBDO15205 165 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 SEMA7AO75326 666 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 ZFAND5O76080 213 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 LRATO95237 230 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 WDPCPO95876 746 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 F10P00742 488 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 CLPSP04118 112 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 VIMP08670 466 aaKnown RBP9.17□□□□□ -0.94
GGA3-209ENST00000580646 S1PR1P21453 382 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 NT5EP21589 574 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 FEN1P39748 380 aaKnown RBP9.17□□□□□ -0.94
GGA3-209ENST00000580646 TNFSF10P50591 281 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 ATP4BP51164 291 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 SLC37A1P57057 533 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 PSPHP78330 225 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 DUSP2Q05923 314 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 LRRC74AQ0VAA2 488 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 ELOAQ14241 798 aaKnown RBP9.17□□□□□ -0.94
GGA3-209ENST00000580646 ZNF267Q14586 743 aaPredicted RBP9.17□□□□□ -0.94
GGA3-209ENST00000580646 MEP1AQ16819 746 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 PRSS53Q2L4Q9 553 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 MPEG1Q2M385 716 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 ZNF385BQ569K4 471 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 CPTPQ5TA50 214 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 NXNQ6DKJ4 435 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 RPUSD3Q6P087 351 aaKnown RBP9.17□□□□□ -0.94
GGA3-209ENST00000580646 HSDL2Q6YN16 418 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 RNF111Q6ZNA4 994 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 CCDC116Q8IYX3 515 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 OR5L2Q8NGL0 311 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 CLHC1Q8NHS4 586 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 PSMA8Q8TAA3 256 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 GRHL3Q8TE85 626 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 FAR1Q8WVX9 515 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 GFM2Q969S9 779 aaKnown RBP9.17□□□□□ -0.94
GGA3-209ENST00000580646 CHMP6Q96FZ7 201 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 AMDHD1Q96NU7 426 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 EBF4Q9BQW3 602 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 CNPPD1Q9BV87 410 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 DEFB126Q9BYW3 111 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 OR8D2Q9GZM6 311 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms