RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 MAP4K2Q12851 820 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 EIF2S3LQ2VIR3 472 aaKnown RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 RFTN2Q52LD8 501 aaPredicted RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 CMPK2Q5EBM0 449 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 PIGGQ5H8A4 983 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 EXOSC6Q5RKV6 272 aaKnown RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 FNDC7Q5VTL7 733 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 SLC25A25Q6KCM7 469 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 NPSR1Q6W5P4 371 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 PAGE2Q7Z2X7 111 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 GALNT12Q8IXK2 581 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 CYP4Z2PQ8N1L4 340 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 BCORP1Q8N888 145 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 PSD4Q8NDX1 1056 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 C16orf52Q8NHV5 167 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 TWIST2Q8WVJ9 160 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 HOXB13Q92826 284 aaPredicted RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 KLHL29Q96CT2 875 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 PELOQ9BRX2 385 aaKnown RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 OLAHQ9NV23 265 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 TAS2R7Q9NYW3 318 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 EHD3Q9NZN3 535 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 ZDHHC2Q9UIJ5 367 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 MID2Q9UJV3 735 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 CNOT11Q9UKZ1 510 aaKnown RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 ZNF835Q9Y2P0 537 aa8.01□□□□□ -1.13
SMG6-210ENST00000572205 YARS2Q9Y2Z4 477 aaKnown RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 POLR3HQ9Y535 204 aaPredicted RBP8.01□□□□□ -1.13
SMG6-210ENST00000572205 MYO7BQ6PIF6 2116 aa8□□□□□ -1.13
SMG6-210ENST00000572205 HCFC1P51610 2035 aa8□□□□□ -1.13
SMG6-210ENST00000572205 ANKUB1A6NFN9 424 aa8□□□□□ -1.13
SMG6-210ENST00000572205 OR6C76A6NM76 312 aa8□□□□□ -1.13
SMG6-210ENST00000572205 MYO1GB0I1T2 1018 aa8□□□□□ -1.13
SMG6-210ENST00000572205 TBX19O60806 448 aa8□□□□□ -1.13
SMG6-210ENST00000572205 RASAL1O95294 804 aa8□□□□□ -1.13
SMG6-210ENST00000572205 H2AFXP16104 143 aaPredicted RBP8□□□□□ -1.13
SMG6-210ENST00000572205 PORP16435 677 aaPredicted RBP8□□□□□ -1.13
SMG6-210ENST00000572205 DDCP20711 480 aa8□□□□□ -1.13
SMG6-210ENST00000572205 GRNP28799 593 aaKnown RBP8□□□□□ -1.13
SMG6-210ENST00000572205 TLX1P31314 330 aaPredicted RBP8□□□□□ -1.13
SMG6-210ENST00000572205 FEN1P39748 380 aaKnown RBP8□□□□□ -1.13
SMG6-210ENST00000572205 RFC3P40938 356 aa8□□□□□ -1.13
SMG6-210ENST00000572205 PTGDSP41222 190 aa8□□□□□ -1.13
SMG6-210ENST00000572205 MAP3K8P41279 467 aa8□□□□□ -1.13
SMG6-210ENST00000572205 MEOX1P50221 254 aa8□□□□□ -1.13
SMG6-210ENST00000572205 SSR4P51571 173 aa8□□□□□ -1.13
SMG6-210ENST00000572205 XKP51811 444 aa8□□□□□ -1.13
SMG6-210ENST00000572205 GPR85P60893 370 aa8□□□□□ -1.13
SMG6-210ENST00000572205 HSF1Q00613 529 aa8□□□□□ -1.13
SMG6-210ENST00000572205 ACSM2AQ08AH3 577 aa8□□□□□ -1.13
SMG6-210ENST00000572205 ASPHQ12797 758 aa8□□□□□ -1.13
SMG6-210ENST00000572205 BIKQ13323 160 aa8□□□□□ -1.13
SMG6-210ENST00000572205 UBAP2LQ14157 1087 aaKnown RBP8□□□□□ -1.13
SMG6-210ENST00000572205 ZNF267Q14586 743 aaPredicted RBP8□□□□□ -1.13
SMG6-210ENST00000572205 EXOSC7Q15024 291 aaKnown RBP8□□□□□ -1.13
SMG6-210ENST00000572205 NTRK2Q16620 822 aa8□□□□□ -1.13
SMG6-210ENST00000572205 TRMT12Q53H54 448 aaKnown RBP8□□□□□ -1.13
SMG6-210ENST00000572205 CEP85LQ5SZL2 805 aa8□□□□□ -1.13
SMG6-210ENST00000572205 ACSM2BQ68CK6 577 aa8□□□□□ -1.13
SMG6-210ENST00000572205 NOXRED1Q6NXP6 359 aa8□□□□□ -1.13
SMG6-210ENST00000572205 FAM180AQ6UWF9 173 aa8□□□□□ -1.13
SMG6-210ENST00000572205 Q6ZPB1 254 aaPredicted RBP8□□□□□ -1.13
SMG6-210ENST00000572205 PNPLA5Q7Z6Z6 429 aaPredicted RBP8□□□□□ -1.13
SMG6-210ENST00000572205 SULF2Q8IWU5 870 aa8□□□□□ -1.13
SMG6-210ENST00000572205 GPALPP1Q8IXQ4 340 aa8□□□□□ -1.13
SMG6-210ENST00000572205 VWA5B2Q8N398 1253 aa8□□□□□ -1.13
SMG6-210ENST00000572205 FAM26EQ8N5C1 309 aa8□□□□□ -1.13
SMG6-210ENST00000572205 GOLM1Q8NBJ4 401 aa8□□□□□ -1.13
SMG6-210ENST00000572205 C17orf47Q8NEP4 570 aa8□□□□□ -1.13
SMG6-210ENST00000572205 ADCY4Q8NFM4 1077 aa8□□□□□ -1.13
SMG6-210ENST00000572205 OR7G2Q8NG99 324 aa8□□□□□ -1.13
SMG6-210ENST00000572205 OR4K14Q8NGD5 310 aa8□□□□□ -1.13
SMG6-210ENST00000572205 OR9A2Q8NGT5 310 aa8□□□□□ -1.13
SMG6-210ENST00000572205 FAM76AQ8TAV0 307 aa8□□□□□ -1.13
SMG6-210ENST00000572205 PAQR8Q8TEZ7 354 aa8□□□□□ -1.13
SMG6-210ENST00000572205 NUDT8Q8WV74 236 aa8□□□□□ -1.13
SMG6-210ENST00000572205 RIT1Q92963 219 aa8□□□□□ -1.13
SMG6-210ENST00000572205 SPACA9Q96E40 222 aaPredicted RBP8□□□□□ -1.13
SMG6-210ENST00000572205 METTL2AQ96IZ6 378 aaKnown RBP8□□□□□ -1.13
SMG6-210ENST00000572205 VSTM2LQ96N03 204 aa8□□□□□ -1.13
SMG6-210ENST00000572205 GPR137Q96N19 417 aa8□□□□□ -1.13
SMG6-210ENST00000572205 BTBD9Q96Q07 612 aa8□□□□□ -1.13
SMG6-210ENST00000572205 SMC6Q96SB8 1091 aa8□□□□□ -1.13
SMG6-210ENST00000572205 CCT7Q99832 543 aa8□□□□□ -1.13
SMG6-210ENST00000572205 CNPPD1Q9BV87 410 aa8□□□□□ -1.13
SMG6-210ENST00000572205 ITPAQ9BY32 194 aa8□□□□□ -1.13
SMG6-210ENST00000572205 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8□□□□□ -1.13
SMG6-210ENST00000572205 NXF5Q9H1B4 397 aaKnown RBP8□□□□□ -1.13
SMG6-210ENST00000572205 ZDHHC11Q9H8X9 412 aa8□□□□□ -1.13
SMG6-210ENST00000572205 AHSPQ9NZD4 102 aa8□□□□□ -1.13
SMG6-210ENST00000572205 LIPGQ9Y5X9 500 aa8□□□□□ -1.13
SMG6-210ENST00000572205 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.99□□□□□ -1.13
SMG6-210ENST00000572205 FCHO1O14526 889 aa7.99□□□□□ -1.13
SMG6-210ENST00000572205 TM9SF1O15321 606 aa7.99□□□□□ -1.13
SMG6-210ENST00000572205 RGS16O15492 202 aaPredicted RBP7.99□□□□□ -1.13
SMG6-210ENST00000572205 SNNO75324 88 aaPredicted RBP7.99□□□□□ -1.13
SMG6-210ENST00000572205 VPS4BO75351 444 aa7.99□□□□□ -1.13
SMG6-210ENST00000572205 TUBBP07437 444 aa7.99□□□□□ -1.13
SMG6-210ENST00000572205 ANXA4P09525 319 aaPredicted RBP7.99□□□□□ -1.13
SMG6-210ENST00000572205 CT45A8P0DMV1 189 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms