RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SUN3Q8TAQ9 357 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PNPT1Q8TCS8 783 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 NUDT8Q8WV74 236 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 GTF2H4Q92759 462 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 KAT2AQ92830 837 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 UCN3Q969E3 161 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 NKD1Q969G9 470 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ANKRD9Q96BM1 317 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PPWD1Q96BP3 646 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 LRRC58Q96CX6 371 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 FBXL20Q96IG2 436 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF681Q96N22 645 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 IP6K3Q96PC2 410 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 CITED4Q96RK1 184 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 GAL3ST4Q96RP7 486 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 CGREF1Q99674 301 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 HOPXQ9BPY8 73 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC39A3Q9BRY0 314 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 INPP5KQ9BT40 448 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 THUMPD3Q9BV44 507 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 CXorf21Q9HAI6 301 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 CACYBPQ9HB71 228 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLAMF7Q9NQ25 335 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 SERHLQ9NQF3 203 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 NECTIN3Q9NQS3 549 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ADA2Q9NZK5 511 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 MAT2BQ9NZL9 334 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PRODH2Q9UF12 536 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 BCAP29Q9UHQ4 241 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ANGPTL2Q9UKU9 493 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 FAF1Q9UNN5 650 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ERVK-19Q9WJR5 959 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 CFL2Q9Y281 166 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 FARSAQ9Y285 508 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 AP3M1Q9Y2T2 418 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 MSRB2Q9Y3D2 182 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 LAMA1P25391 3075 aa6.15□□□□□ -1.43
CTDNEP1-204ENST00000570484 COL27A1Q8IZC6 1860 aaPredicted RBP6.15□□□□□ -1.43
CTDNEP1-204ENST00000570484 DMDP11532 3685 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 A0A087WV62 115 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 NSG1A0A0A6YYJ2 146 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 LOC101059948A0A1B0GTJ6 334 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 A0A1W2PS29 197 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR2W5A6NFC9 320 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 CLIC1O00299 241 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 DNAJA2O60884 412 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 CNOT3O75175 753 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 GMNNO75496 209 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 KLF7O75840 302 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 AGR2O95994 175 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 UMODP07911 640 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 ADRB1P08588 477 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 IFI6P09912 130 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZCCHC18P0CG32 403 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 CDKN2CP42773 168 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 CRATP43155 626 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 CCT3P49368 545 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC7A2P52569 658 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 FOXL2P58012 376 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 MTPNP58546 118 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 PSME3P61289 254 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 TXNL4AP83876 142 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC25A3Q00325 362 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 DUSP2Q05923 314 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 FADDQ13158 208 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 LASP1Q14847 261 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 EXT1Q16394 746 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 PRICKLE4Q2TBC4 344 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 BTBD16Q32M84 506 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 GTDC1Q4AE62 458 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF628Q5EBL2 1059 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 SAMD4BQ5PRF9 694 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 ATAD3BQ5T9A4 648 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 CPZQ66K79 652 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 FAM111BQ6SJ93 734 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 C6orf89Q6UWU4 347 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 RINLQ6ZS11 566 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 YTHDF3Q7Z739 585 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 MRGPREQ86SM8 312 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 VASH2Q86V25 355 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 DEFB107AQ8IZN7 70 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR2L13Q8N349 312 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 COX18Q8N8Q8 333 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZSCAN1Q8NBB4 408 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 MORN4Q8NDC4 146 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 NUP43Q8NFH3 380 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 TNIP2Q8NFZ5 429 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR7G2Q8NG99 324 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR7G1Q8NGA0 311 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR52R1Q8NGF1 315 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 GOT1L1Q8NHS2 421 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 PSMA8Q8TAA3 256 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 FBXO30Q8TB52 745 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC2A12Q8TD20 617 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC9A6Q92581 669 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 NCLNQ969V3 563 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 NACC2Q96BF6 587 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 C8orf44Q96CB5 159 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 ELP4Q96EB1 424 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms