RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 BBS4Q96RK4 519 aa18.72■□□□□ 0.59
CMTM3-206ENST00000563672 PAIP2Q9BPZ3 127 aaKnown RBP18.72■□□□□ 0.59
CMTM3-206ENST00000563672 SH2D2AQ9NP31 389 aa18.72■□□□□ 0.59
CMTM3-206ENST00000563672 BCAP29Q9UHQ4 241 aa18.72■□□□□ 0.59
CMTM3-206ENST00000563672 BAIAP2L1Q9UHR4 511 aa18.72■□□□□ 0.59
CMTM3-206ENST00000563672 CFL2Q9Y281 166 aa18.72■□□□□ 0.59
CMTM3-206ENST00000563672 DTX4Q9Y2E6 619 aa18.72■□□□□ 0.59
CMTM3-206ENST00000563672 ATP6AP2A0A1C7CYW4 349 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 TBX19O60806 448 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 PEX11AO75192 247 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 SKAP2O75563 359 aaPredicted RBP18.71■□□□□ 0.59
CMTM3-206ENST00000563672 ATP6AP2O75787 350 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 BCAS2O75934 225 aaPredicted RBP18.71■□□□□ 0.59
CMTM3-206ENST00000563672 H2AFXP16104 143 aaPredicted RBP18.71■□□□□ 0.59
CMTM3-206ENST00000563672 EMDP50402 254 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 NR0B1P51843 470 aaKnown RBP18.71■□□□□ 0.59
CMTM3-206ENST00000563672 GPR85P60893 370 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 ALDH6A1Q02252 535 aaKnown RBP18.71■□□□□ 0.59
CMTM3-206ENST00000563672 UBAP2LQ14157 1087 aaKnown RBP18.71■□□□□ 0.59
CMTM3-206ENST00000563672 C6orf136Q5SQH8 315 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 FHL5Q5TD97 284 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 HLA-DQA1Q5Y7H0 255 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 FAM9CQ8IZT9 166 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 OR52R1Q8NGF1 315 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 KAT2AQ92830 837 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 TSSK3Q96PN8 268 aa18.71■□□□□ 0.59
CMTM3-206ENST00000563672 HIVEP3Q5T1R4 2406 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 PLOD3O60568 738 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 FLNBO75369 2602 aaKnown RBP18.7■□□□□ 0.58
CMTM3-206ENST00000563672 JUNP05412 331 aaKnown RBP18.7■□□□□ 0.58
CMTM3-206ENST00000563672 CCL3P10147 92 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 ZNF24P17028 368 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 CNR1P21554 472 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 RPL14P50914 215 aaKnown RBP18.7■□□□□ 0.58
CMTM3-206ENST00000563672 BST1Q10588 318 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 PDE7AQ13946 482 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 ATP6AP1LQ52LC2 224 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 GFRALQ6UXV0 394 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 OR2M7Q8NG81 312 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 PAQR8Q8TEZ7 354 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 GFM2Q969S9 779 aaKnown RBP18.7■□□□□ 0.58
CMTM3-206ENST00000563672 ITPAQ9BY32 194 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 NXF5Q9H1B4 397 aaKnown RBP18.7■□□□□ 0.58
CMTM3-206ENST00000563672 REEP4Q9H6H4 257 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 SACM1LQ9NTJ5 587 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 SEC14L3Q9UDX4 400 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 PRODH2Q9UF12 536 aa18.7■□□□□ 0.58
CMTM3-206ENST00000563672 A0A0G2JMM0 328 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 A0A1W2PPB8 328 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 A0A1W2PRS3 328 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 PINLYPA6NC86 204 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 KIR3DP1A8MWS1 328 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 SEMA7AO75326 666 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 UNC5CO95185 931 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 MAPK1P28482 360 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 ASMTP46597 345 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 NCBP2P52298 156 aaKnown RBP eCLIP18.69■□□□□ 0.58
CMTM3-206ENST00000563672 KCNK10P57789 538 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 NTRK2Q16620 822 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 KRTCAP3Q53RY4 240 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 SLC22A10Q63ZE4 541 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 TMEM64Q6YI46 380 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 KIRREL3Q8IZU9 778 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 OR7G2Q8NG99 324 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 CLHC1Q8NHS4 586 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 MGARPQ8TDB4 240 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 TUBGCP3Q96CW5 907 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 GPR137Q96N19 417 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 AMDHD1Q96NU7 426 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 GLIPR2Q9H4G4 154 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 ANKRA2Q9H9E1 313 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 ARGLU1Q9NWB6 273 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-206ENST00000563672 NKIRAS1Q9NYS0 192 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 NPFFR2Q9Y5X5 522 aa18.69■□□□□ 0.58
CMTM3-206ENST00000563672 CHCHD2Q9Y6H1 151 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-206ENST00000563672 NPIPA5E9PKD4 350 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 PLOD2O00469 737 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 AKAP10O43572 662 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 SLITRK5O94991 958 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 LRATO95237 230 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 DRD5P21918 477 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 NTSP30990 170 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 RFC3P40938 356 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 PPICP45877 212 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 DCAF7P61962 342 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 PDCD2Q16342 344 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-206ENST00000563672 ZNF385BQ569K4 471 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 ANKRD26P1Q6NSI1 321 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 HDXQ7Z353 690 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 OR10G3Q8NGC4 313 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 MTERF3Q96E29 417 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 LCORQ96JN0 433 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-206ENST00000563672 FAM173AQ9BQD7 235 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 TSPAN10Q9H1Z9 355 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-206ENST00000563672 CNIH4Q9P003 139 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 NPIPA1Q9UND3 350 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 OSGIN2Q9Y236 505 aa18.68■□□□□ 0.58
CMTM3-206ENST00000563672 CROCCQ5TZA2 2017 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 A0A087WV62 115 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 CAPN14A8MX76 684 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms