RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 UGT1A4P22310 534 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 PRKACGP22612 351 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 FCARP24071 287 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 EDNRAP25101 427 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 FCGR2BP31994 310 aaPredicted RBP2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 MATKP42679 507 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 HTR5AP47898 357 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 SLC6A8P48029 635 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 SLC1A6P48664 564 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 NUMBP49757 651 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 TMEM50BP56557 158 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 NOP14P78316 857 aaKnown RBP2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 EXOSC2Q13868 293 aaKnown RBP2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 KNOP1Q1ED39 458 aaKnown RBP2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 HKDC1Q2TB90 917 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 NADK2Q4G0N4 442 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 UNC50Q53HI1 259 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 TMEM41BQ5BJD5 291 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 ASPHD2Q6ICH7 369 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 SLC39A4Q6P5W5 647 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 CASC1Q6TDU7 716 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 KDELC1Q6UW63 502 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF841Q6ZN19 808 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 DPY19L2P2Q6ZN68 376 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 LPCAT2Q7L5N7 544 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 LRRTM1Q86UE6 522 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 MYPOPQ86VE0 399 aaPredicted RBP2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 OR4N5Q8IXE1 308 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 ARFGAP2Q8N6H7 521 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 AQP11Q8NBQ7 271 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 MAPK1IP1LQ8NDC0 245 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 NUP37Q8NFH4 326 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 OR4F17Q8NGA8 305 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 OR2T34Q8NGX1 318 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 OR10T2Q8NGX3 314 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 OR4F5Q8NH21 305 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 WDR36Q8NI36 951 aaKnown RBP2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 C8orf46Q8TAG6 207 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 GTF3AQ92664 365 aaKnown RBP2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 ATXN7L3BQ96GX2 97 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 OR4F4Q96R69 305 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 NDUFAF3Q9BU61 184 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 DCTPP1Q9H773 170 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 KAT8Q9H7Z6 458 aaKnown RBP2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 CALHM2Q9HA72 323 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 WDR41Q9HAD4 459 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 ADGRL4Q9HBW9 690 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 NRN1Q9NPD7 142 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 FARSBQ9NSD9 589 aaKnown RBP2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 C1orf123Q9NWV4 160 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 ATP6V1HQ9UI12 483 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 SLC9A8Q9Y2E8 581 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 LOC105371242A0A075B767 164 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 IGKV3D-15A0A087WSY6 115 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 KRTAP16-1A8MUX0 517 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 K7EQD1 137 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 CCSO14618 274 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 XPO1O14980 1071 aaKnown RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 MAPK13O15264 365 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 INPP4BO15327 924 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 RANBP6O60518 1105 aaKnown RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 TBX6O95947 436 aaPredicted RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 GOT2P00505 430 aaKnown RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 APRTP07741 180 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 FHP07954 510 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 ASNSP08243 561 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 ADORA3P0DMS8 318 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 DRD5P21918 477 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 CYLC1P35663 651 aaPredicted RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 SGSHP51688 502 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 METAP1P53582 386 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 NAAAQ02083 359 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 CALCOCO2Q13137 446 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 FASTKD3Q14CZ7 662 aaKnown RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 NECTIN1Q15223 517 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 CAMK4Q16566 473 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 MOGAT2Q3SYC2 334 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 RABGAP1LQ5R372 815 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 BEND6Q5SZJ8 279 aaPredicted RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 DDI2Q5TDH0 399 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 NCR3LG1Q68D85 454 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 BLOC1S2Q6QNY1 142 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 METTL7BQ6UX53 244 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 C3P1Q6ZMU1 363 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 Q7L0L9 218 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 PRSS48Q7RTY5 328 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 GOLGA7Q7Z5G4 137 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 LUZP1Q86V48 1076 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 C17orf64Q86WR6 236 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 TBC1D10CQ8IV04 446 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 GCNT2Q8N0V5 402 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 SPEM1Q8N4L4 309 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 COLGALT1Q8NBJ5 622 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 STKLD1Q8NE28 680 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 GIPC3Q8TF64 312 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 U2AF1L4Q8WU68 220 aaKnown RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 N4BP2L2Q92802 583 aaPredicted RBP2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 NCLNQ969V3 563 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 HPDLQ96IR7 371 aa2.7□□□□□ -1.98
SHCBP1-202ENST00000563219 VPS35Q96QK1 796 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms