RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 TEX10Q9NXF1 929 aaPredicted RBP9.01□□□□□ -0.97
TPM1-225ENST00000560679 PACSIN3Q9UKS6 424 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 ZNF490Q9ULM2 529 aaPredicted RBP9.01□□□□□ -0.97
TPM1-225ENST00000560679 ERVK-19Q9WJR5 959 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 RNF223E7ERA6 249 aa9□□□□□ -0.97
TPM1-225ENST00000560679 E7ESA3 106 aa9□□□□□ -0.97
TPM1-225ENST00000560679 NDUFAB1O14561 156 aa9□□□□□ -0.97
TPM1-225ENST00000560679 CDH16O75309 829 aa9□□□□□ -0.97
TPM1-225ENST00000560679 PRKRAO75569 313 aaKnown RBP9□□□□□ -0.97
TPM1-225ENST00000560679 WDR47O94967 919 aa9□□□□□ -0.97
TPM1-225ENST00000560679 SCELO95171 688 aa9□□□□□ -0.97
TPM1-225ENST00000560679 COX7A2P14406 83 aa9□□□□□ -0.97
TPM1-225ENST00000560679 CPN1P15169 458 aa9□□□□□ -0.97
TPM1-225ENST00000560679 GNAZP19086 355 aa9□□□□□ -0.97
TPM1-225ENST00000560679 ATP5A1P25705 553 aaKnown RBP9□□□□□ -0.97
TPM1-225ENST00000560679 KCNC1P48547 511 aa9□□□□□ -0.97
TPM1-225ENST00000560679 SLC37A1P57057 533 aa9□□□□□ -0.97
TPM1-225ENST00000560679 SARNPP82979 210 aaKnown RBP9□□□□□ -0.97
TPM1-225ENST00000560679 PDIA2Q13087 525 aaKnown RBP9□□□□□ -0.97
TPM1-225ENST00000560679 PDAP1Q13442 181 aaKnown RBP9□□□□□ -0.97
TPM1-225ENST00000560679 C10orf62Q5T681 223 aaPredicted RBP9□□□□□ -0.97
TPM1-225ENST00000560679 ZNF550Q7Z398 422 aa9□□□□□ -0.97
TPM1-225ENST00000560679 YRDCQ86U90 279 aaKnown RBP9□□□□□ -0.97
TPM1-225ENST00000560679 TDRPQ86YL5 185 aa9□□□□□ -0.97
TPM1-225ENST00000560679 HIPK1Q86Z02 1210 aa9□□□□□ -0.97
TPM1-225ENST00000560679 CNTN4Q8IWV2 1026 aa9□□□□□ -0.97
TPM1-225ENST00000560679 GPATCH11Q8N954 259 aa9□□□□□ -0.97
TPM1-225ENST00000560679 ACOT4Q8N9L9 421 aa9□□□□□ -0.97
TPM1-225ENST00000560679 MCUQ8NE86 351 aa9□□□□□ -0.97
TPM1-225ENST00000560679 WNT2BQ93097 391 aa9□□□□□ -0.97
TPM1-225ENST00000560679 CTHRC1Q96CG8 243 aa9□□□□□ -0.97
TPM1-225ENST00000560679 TMEM41AQ96HV5 264 aa9□□□□□ -0.97
TPM1-225ENST00000560679 KCNC2Q96PR1 638 aa9□□□□□ -0.97
TPM1-225ENST00000560679 TM9SF2Q99805 663 aa9□□□□□ -0.97
TPM1-225ENST00000560679 PLAC1Q9HBJ0 212 aa9□□□□□ -0.97
TPM1-225ENST00000560679 XAB2Q9HCS7 855 aaKnown RBP9□□□□□ -0.97
TPM1-225ENST00000560679 FETUBQ9UGM5 382 aa9□□□□□ -0.97
TPM1-225ENST00000560679 DTX4Q9Y2E6 619 aa9□□□□□ -0.97
TPM1-225ENST00000560679 EXOC1LA0A1B0GW35 172 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 GMNCA6NCL1 334 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 H0Y3Z8 333 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 GNB5O14775 395 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 MSTNO14793 375 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 SNX4O95219 450 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 ACTL6AO96019 429 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 IFNA2P01563 188 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 CHN1P15882 459 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 ZNF37AP17032 561 aaPredicted RBP8.99□□□□□ -0.97
TPM1-225ENST00000560679 HIST1H1TP22492 207 aaPredicted RBP8.99□□□□□ -0.97
TPM1-225ENST00000560679 CD79BP40259 229 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 CASP3P42574 277 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 CCT5P48643 541 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 MASP1P48740 699 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 PCYT1AP49585 367 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 DIO3P55073 304 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 CDKL1Q00532 357 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 PLIN5Q00G26 463 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 FASTKD3Q14CZ7 662 aaKnown RBP8.99□□□□□ -0.97
TPM1-225ENST00000560679 RASA2Q15283 850 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 TOMM20Q15388 145 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 SPRED3Q2MJR0 410 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 KRTAP24-1Q3LI83 254 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 TIGD3Q6B0B8 471 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 VWA1Q6PCB0 445 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 ZNF474Q6S9Z5 364 aaPredicted RBP8.99□□□□□ -0.97
TPM1-225ENST00000560679 RNF111Q6ZNA4 994 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 SLC29A4Q7RTT9 530 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 ZBED8Q8IZ13 594 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 KRT78Q8N1N4 520 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 ZNF473Q8WTR7 871 aaKnown RBP8.99□□□□□ -0.97
TPM1-225ENST00000560679 RHBDF1Q96CC6 855 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 STARD4Q96DR4 205 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 PDLIM5Q96HC4 596 aaKnown RBP8.99□□□□□ -0.97
TPM1-225ENST00000560679 ART5Q96L15 291 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 TMEM79Q9BSE2 394 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 MED18Q9BUE0 208 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 SORBS1Q9BX66 1292 aaKnown RBP8.99□□□□□ -0.97
TPM1-225ENST00000560679 MS4A8Q9BY19 250 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 PITHD1Q9GZP4 211 aaPredicted RBP8.99□□□□□ -0.97
TPM1-225ENST00000560679 RABEP2Q9H5N1 569 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 ZNF226Q9NYT6 803 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 OARD1Q9Y530 152 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 ACTL7BQ9Y614 415 aa8.99□□□□□ -0.97
TPM1-225ENST00000560679 IQANK1A0A1B0GTG1 560 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 ANKDD1BA6NHY2 528 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 WASHC1A8K0Z3 465 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 EBAG9O00559 213 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 TP53I11O14683 189 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 WIPF1O43516 503 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 HCRTR2O43614 444 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 CD5LO43866 347 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 BANF1O75531 89 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 TGM6O95932 706 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 FAM107AO95990 144 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 ALOX15P16050 662 aaPredicted RBP8.98□□□□□ -0.97
TPM1-225ENST00000560679 EPORP19235 508 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 CPN2P22792 545 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 PHBP35232 272 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 UGT2B10P36537 528 aa8.98□□□□□ -0.97
TPM1-225ENST00000560679 PTGDSP41222 190 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms