RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 C11orf98E9PRG8 122 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 TNFRSF11BO00300 401 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 NME4O00746 187 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 CLOCKO15516 846 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 EMC8O43402 210 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 HYAL3O43820 417 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-209ENST00000560637 CREG1O75629 220 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 RFPL3O75679 317 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 GPR75O95800 540 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 CLIC3O95833 236 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 PEX2P28328 305 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 TPP2P29144 1249 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-209ENST00000560637 SLC9A3P48764 834 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 LIM2P55344 173 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF385BQ569K4 471 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 COX20Q5RI15 118 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 ABHD17BQ5VST6 288 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 TTC33Q6PID6 262 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF793Q6ZN11 406 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 WDR5BQ86VZ2 330 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 CBR4Q8N4T8 237 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 CLEC1AQ8NC01 280 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 SLC16A11Q8NCK7 471 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 OR5P2Q8WZ92 322 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 ISL2Q96A47 359 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 CLDN23Q96B33 292 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 TM4SF18Q96CE8 201 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 TTTY10Q9BZA0 68 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 GLIPR2Q9H4G4 154 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF160Q9HCG1 818 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 C11orf16Q9NQ32 467 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 ABI3Q9P2A4 366 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 MRTO4Q9UKD2 239 aaKnown RBP5.12□□□□□ -1.59
VPS13C-209ENST00000560637 AP1M2Q9Y6Q5 423 aa5.12□□□□□ -1.59
VPS13C-209ENST00000560637 A0A1B0GX78 115 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 DUXAA6NLW8 204 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 BLOC1S5-TXNDC5H3BN57 136 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 LILRB5O75023 590 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 CPNE3O75131 537 aaKnown RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 UQCRBP14927 111 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 ANPEPP15144 967 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 DNAJA1P31689 397 aaKnown RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 AHRP35869 848 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 CASRP41180 1078 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 GUCA1AP43080 201 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 DGCR6Q14129 220 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 SLC35F1Q5T1Q4 408 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 RAET1LQ5VY80 246 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 FAM91A1Q658Y4 838 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 LAIR1Q6GTX8 287 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 LRRC74BQ6ZQY2 392 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 FUNDC1Q8IVP5 155 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 TMEM151AQ8N4L1 468 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 BPIFB6Q8NFQ5 453 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 OR51A7Q8NH64 312 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 FAM174AQ8TBP5 190 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 SENP5Q96HI0 755 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 CDC6Q99741 560 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 DOHHQ9BU89 302 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 TWSG1Q9GZX9 223 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 CXorf36Q9H7Y0 433 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 TNFRSF10DQ9UBN6 386 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 FBXO4Q9UKT5 387 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 PPT2Q9UMR5 302 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 PRPF19Q9UMS4 504 aaKnown RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 DAPP1Q9UN19 280 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 SATB2Q9UPW6 733 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 CORO2BQ9UQ03 480 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 SNX5Q9Y5X3 404 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 TANC1Q9C0D5 1861 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 A0A1W2PR77 199 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 A8MVJ9 347 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 MAN1A2O60476 641 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 UGDHO60701 494 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 FABP3P05413 133 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 BMP7P18075 431 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 VHLP40337 213 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 PTDSS1P48651 473 aaKnown RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 RAD23AP54725 363 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 ARG2P78540 354 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 MS4A2Q01362 244 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 SLC34A1Q06495 639 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 ELOAQ14241 798 aaKnown RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 CYBRD1Q53TN4 286 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 ARMC3Q5W041 872 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 ENPP6Q6UWR7 440 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 VN1R4Q7Z5H5 301 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 AMER2Q8N7J2 671 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 ENDOVQ8N8Q3 282 aaKnown RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 ANKFN1Q8N957 763 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 POMGNT2Q8NAT1 580 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 OR56A1Q8NGH5 318 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 ASB15Q8WXK1 588 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 ROPN1LQ96C74 230 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 AKIRIN1Q9H9L7 192 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 HPF1Q9NWY4 346 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 CMTM6Q9NX76 183 aa5.11□□□□□ -1.59
VPS13C-209ENST00000560637 NFKBIL1Q9UBC1 381 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 SUCOQ9UBS9 1254 aaKnown RBP5.11□□□□□ -1.59
VPS13C-209ENST00000560637 SAMD4AQ9UPU9 718 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms