RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ERVK-19Q9WJR5 959 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 POLHQ9Y253 713 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 CLCA3PQ9Y6N3 262 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 A0A096LPI6 279 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 OR6C76A6NM76 312 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 BBIP1A8MTZ0 92 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 A8MUA0 341 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 FXYD1O00168 92 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 NR5A2O00482 541 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 BCAS2O75934 225 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 SERPINA7P05543 415 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 ICAM2P13598 275 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 EFNA1P20827 205 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 NT5EP21589 574 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 SSTR4P31391 388 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 MC3RP41968 323 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 MAN2A2P49641 1150 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 TMPRSS3P57727 454 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 VAC14Q08AM6 782 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 GAB1Q13480 694 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 ZNF267Q14586 743 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 KRT72Q14CN4 511 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 EBPQ15125 230 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 MAPRE2Q15555 327 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 MAPKAPK3Q16644 382 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 AP1ARQ63HQ0 302 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 C8orf82Q6P1X6 216 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 SLC2A7Q6PXP3 512 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 C6orf89Q6UWU4 347 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 TMEM107Q6UX40 140 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 ANKRD46Q86W74 232 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 C9orf40Q8IXQ3 194 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 C17orf47Q8NEP4 570 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 DNAJB8Q8NHS0 232 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 MIPOL1Q8TD10 442 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 KAT2AQ92830 837 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 NCLNQ969V3 563 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 MOAP1Q96BY2 351 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 FER1L6-AS2Q96M78 137 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 VSTM2LQ96N03 204 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 NPAS2Q99743 824 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 OR10A5Q9H207 317 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 ZNF160Q9HCG1 818 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 RYDENQ9NUL5 291 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 SLC25A37Q9NYZ2 338 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 SLAMF8Q9P0V8 285 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 LEF1Q9UJU2 399 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 NDUFAF1Q9Y375 327 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 KCNMB2Q9Y691 235 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 BSNQ9UPA5 3926 aa13.76□□□□□ -0.21
SNRPA1-207ENST00000559309 MGAQ8IWI9 3026 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 MASP2O00187 686 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 PEX12O00623 359 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 EMC8O43402 210 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 PRKNO60260 465 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 ERN1O75460 977 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 NPPAP01160 153 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 C1QCP02747 245 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 CELA2AP08217 269 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 COX4I1P13073 169 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 SOX11P35716 441 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 HSPB3Q12988 150 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 AIMP2Q13155 320 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 MYBPC3Q14896 1274 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 BROXQ5VW32 411 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 SAXO2Q658L1 398 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 JMJD6Q6NYC1 403 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 LRRC69Q6ZNQ3 347 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 SNX32Q86XE0 403 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 C16orf52Q8NHV5 167 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 NUBPLQ8TB37 319 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 ZFP90Q8TF47 636 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 ADIPOR1Q96A54 375 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 NEURL3Q96EH8 262 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 ITCHQ96J02 903 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 RMND5AQ9H871 391 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 ANKRA2Q9H9E1 313 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 CPNE5Q9HCH3 593 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 GIN1Q9NXP7 522 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 DTX4Q9Y2E6 619 aa13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 SETXQ7Z333 2677 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-207ENST00000559309 PRAMEF2O60811 474 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 T-ENOLP0DO92 83 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 ITGAMP11215 1152 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 TNNI3P19429 210 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 UQCRC2P22695 453 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 CCT3P49368 545 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 CLCN2P51788 898 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 RRADP55042 308 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 RNF4P78317 190 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 CBX1P83916 185 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 STX5Q13190 355 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 CYLC2Q14093 348 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 EXOSC7Q15024 291 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 ZCCHC12Q6PEW1 402 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 KBTBD2Q8IY47 623 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 LGI4Q8N135 537 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 KIF2BQ8N4N8 673 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 OR4A15Q8NGL6 344 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 DOK4Q8TEW6 326 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms