RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CLEC18CQ8NCF0 446 aa13.03□□□□□ -0.32
SLIRP-207ENST00000556831 ADCY4Q8NFM4 1077 aa13.03□□□□□ -0.32
SLIRP-207ENST00000556831 SPACA9Q96E40 222 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-207ENST00000556831 CNRIP1Q96F85 164 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-207ENST00000556831 MAT2BQ9NZL9 334 aa13.03□□□□□ -0.32
SLIRP-207ENST00000556831 OSGIN2Q9Y236 505 aa13.03□□□□□ -0.32
SLIRP-207ENST00000556831 PTGDR2Q9Y5Y4 395 aa13.03□□□□□ -0.32
SLIRP-207ENST00000556831 HIVEP3Q5T1R4 2406 aa13.03□□□□□ -0.32
SLIRP-207ENST00000556831 NPIPA5E9PKD4 350 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 SEMA7AO75326 666 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 SLITRK5O94991 958 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 CT62P0C5K7 136 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 HPCAL1P37235 193 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 RPL3P39023 403 aaKnown RBP13.02□□□□□ -0.33
SLIRP-207ENST00000556831 NCBP2P52298 156 aaKnown RBP eCLIP13.02□□□□□ -0.337e-14■■■□□ 15.3
SLIRP-207ENST00000556831 ABCE1P61221 599 aaKnown RBP13.02□□□□□ -0.33
SLIRP-207ENST00000556831 CASP8Q14790 479 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.02□□□□□ -0.335e-7■■■■□ 21.9
SLIRP-207ENST00000556831 MDGA2Q7Z553 956 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 ZNF227Q86WZ6 799 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 SULF2Q8IWU5 870 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 OR52R1Q8NGF1 315 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 OR9A2Q8NGT5 310 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 ZFP28Q8NHY6 868 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 ZNF675Q8TD23 568 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 MGARPQ8TDB4 240 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 TP53INP1Q96A56 240 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 TUBGCP3Q96CW5 907 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 ERP27Q96DN0 273 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 C11orf24Q96F05 449 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-207ENST00000556831 FAM173AQ9BQD7 235 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 TSPAN10Q9H1Z9 355 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-207ENST00000556831 NPIPA1Q9UND3 350 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 SLC5A6Q9Y289 635 aa13.02□□□□□ -0.33
SLIRP-207ENST00000556831 ESPL1Q14674 2120 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 TMEM120BA0PK00 339 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 NPIPB8E9PQR5 432 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 LSM1O15116 133 aaKnown RBP13.01□□□□□ -0.33
SLIRP-207ENST00000556831 PDPK1O15530 556 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 CDC40O60508 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
SLIRP-207ENST00000556831 COQ9O75208 318 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 PTGER1P34995 402 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 GPC1P35052 558 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 KRT20P35900 424 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 SLC1A6P48664 564 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 TDGF1P3P51864 188 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 KCNK10P57789 538 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 MAGOHP61326 146 aaKnown RBP13.01□□□□□ -0.33
SLIRP-207ENST00000556831 DCAF7P61962 342 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 KCNJ2P63252 427 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 MRPS35P82673 323 aaKnown RBP13.01□□□□□ -0.33
SLIRP-207ENST00000556831 MAD2L1Q13257 205 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-207ENST00000556831 STX3Q13277 289 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 EXOSC7Q15024 291 aaKnown RBP13.01□□□□□ -0.33
SLIRP-207ENST00000556831 RPS6KA2Q15349 733 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 LTB4RQ15722 352 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 SLC22A10Q63ZE4 541 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 ZNF324BQ6AW86 544 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-207ENST00000556831 FAM71E1Q6IPT2 247 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 PAOXQ6QHF9 649 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 FAM111BQ6SJ93 734 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 RGS9BPQ6ZS82 235 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 R3HCC1LQ7Z5L2 792 aaKnown RBP13.01□□□□□ -0.33
SLIRP-207ENST00000556831 SLC22A16Q86VW1 577 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 TRIM42Q8IWZ5 723 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 GHDCQ8N2G8 530 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 FNDC5Q8NAU1 212 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 C17orf47Q8NEP4 570 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 OR5M3Q8NGP4 307 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 OR2T11Q8NH01 316 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 C16orf52Q8NHV5 167 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 SSC4DQ8WTU2 575 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 GFM2Q969S9 779 aaKnown RBP13.01□□□□□ -0.33
SLIRP-207ENST00000556831 PPCDCQ96CD2 204 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 GPR137Q96N19 417 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 ZNF681Q96N22 645 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 TSSK3Q96PN8 268 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 TAS2R9Q9NYW1 312 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 CNIH4Q9P003 139 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 SUCOQ9UBS9 1254 aaKnown RBP13.01□□□□□ -0.33
SLIRP-207ENST00000556831 ZDHHC2Q9UIJ5 367 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 SVILO95425 2214 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 NF1P21359 2839 aa13.01□□□□□ -0.33
SLIRP-207ENST00000556831 TRGV8A0A0C4DH27 118 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 A0A1B0GUH1 482 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 G3V3Y1 287 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 ACOX3O15254 700 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 PEX11AO75192 247 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 LRATO95237 230 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 JUNP05412 331 aaKnown RBP13□□□□□ -0.33
SLIRP-207ENST00000556831 FBXO45P0C2W1 286 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 ABOP16442 354 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 PCSK2P16519 638 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 SDC1P18827 310 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 CNR1P21554 472 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 BGNP21810 368 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 GPX3P22352 226 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 MST1P26927 711 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 RFC3P40938 356 aa13□□□□□ -0.33
SLIRP-207ENST00000556831 PSPHP78330 225 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms