RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 RRADP55042 308 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 NRG3P56975 720 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 EEFSECP57772 596 aaKnown RBP10.45□□□□□ -0.74
SHMT2-220ENST00000555634 DSTNP60981 165 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 NCALDP61601 193 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 DCAF7P61962 342 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 PHC1P78364 1004 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 MRPS35P82673 323 aaKnown RBP10.45□□□□□ -0.74
SHMT2-220ENST00000555634 FOXK2Q01167 660 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 BNIP2Q12982 314 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 LASP1Q14847 261 aaKnown RBP10.45□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF750Q32MQ0 723 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 INTS11Q5TA45 600 aaKnown RBP10.45□□□□□ -0.74
SHMT2-220ENST00000555634 BROXQ5VW32 411 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 SAXO2Q658L1 398 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 NANOGP8Q6NSW7 305 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 TMEM205Q6UW68 189 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 DLEU7Q6UYE1 221 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 LANCL3Q6ZV70 420 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 TIPARPQ7Z3E1 657 aaKnown RBP10.45□□□□□ -0.74
SHMT2-220ENST00000555634 C6orf120Q7Z4R8 191 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 SERPINA11Q86U17 422 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 LAPTM4BQ86VI4 370 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 RNF130Q86XS8 419 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 MARCH9Q86YJ5 346 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 B3GNT7Q8NFL0 401 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 OR2T12Q8NG77 320 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 OR7G2Q8NG99 324 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 OR52R1Q8NGF1 315 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 ADAMTS15Q8TE58 950 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 ZFP90Q8TF47 636 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 NUDT8Q8WV74 236 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 UCN3Q969E3 161 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 NCLNQ969V3 563 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 LRGUKQ96M69 825 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 THTPAQ9BU02 230 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 ACTRT3Q9BYD9 372 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 MUC13Q9H3R2 512 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 NANOGQ9H9S0 305 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 Q9N2J8 555 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
SHMT2-220ENST00000555634 CALML5Q9NZT1 146 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 MAP10Q9P2G4 905 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 C19orf53Q9UNZ5 99 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-220ENST00000555634 ANGPT4Q9Y264 503 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 OR10H1Q9Y4A9 318 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 EXPH5Q8NEV8 1989 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 LOC102723996A0A087X1L8 192 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 MYOCOSA0A1B0GUC4 107 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 FAM220BPB1ANY3 271 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 UPK1AO00322 258 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 RRP8O43159 456 aaKnown RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 CREG1O75629 220 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 KLF7O75840 302 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 PDE9AO76083 593 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 SEC24DO94855 1032 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 RECKO95980 971 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 HPP00738 406 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 HMGN2P05204 90 aaKnown RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 T-ENOLP0DO92 83 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 MATN1P21941 496 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 SLC6A2P23975 617 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 CLCN2P51788 898 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 PSMD4P55036 377 aaKnown RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 CAMK2BQ13554 666 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF630Q2M218 657 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 BTBD16Q32M84 506 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 RUNDC3AQ59EK9 446 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 LCN10Q6JVE6 187 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 FAM111BQ6SJ93 734 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 HSDL2Q6YN16 418 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 NDUFAF7Q7L592 441 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 IFNEQ86WN2 208 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 KRT73Q86Y46 540 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 LGI4Q8N135 537 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 COX18Q8N8Q8 333 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 CLEC1AQ8NC01 280 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 C11orf65Q8NCR3 313 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 OR5L2Q8NGL0 311 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 OR1N1Q8NGS0 311 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 SLC9A6Q92581 669 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 FGF11Q92914 225 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 POP5Q969H6 163 aaKnown RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 CCDC124Q96CT7 223 aaKnown RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 AURKBQ96GD4 344 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 REXO5Q96IC2 774 aaKnown RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 FER1L6-AS2Q96M78 137 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 GAL3ST4Q96RP7 486 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 CDRT15Q96T59 188 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 DPH1Q9BZG8 443 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 SPRY4Q9C004 299 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF700Q9H0M5 742 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 OR10A5Q9H207 317 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 SIRT3Q9NTG7 399 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 TAS2R1Q9NYW7 299 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 SLC25A37Q9NYZ2 338 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 ABCD2Q9UBJ2 740 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 SUCOQ9UBS9 1254 aaKnown RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 MAGEL2Q9UJ55 1249 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms