RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TMEM154Q6P9G4 183 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 KANSL1Q7Z3B3 1105 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 BMP8AQ7Z5Y6 402 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 VTCN1Q7Z7D3 282 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 SLC44A2Q8IWA5 706 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-215ENST00000547672 MAML2Q8IZL2 1156 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-215ENST00000547672 PIK3C3Q8NEB9 887 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 CYGBQ8WWM9 190 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 RAB8BQ92930 207 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 CCDC74AQ96AQ1 378 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 COL21A1Q96P44 957 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 ZNF300Q96RE9 604 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-215ENST00000547672 PIP5K1AQ99755 562 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 PINK1Q9BXM7 581 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 PIGUQ9H490 435 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 ZNF768Q9H5H4 540 aaKnown RBP12.61□□□□□ -0.39
PTCH1-215ENST00000547672 ZNF556Q9HAH1 456 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 PRTFDC1Q9NRG1 225 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 DUSP22Q9NRW4 184 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 STARD5Q9NSY2 213 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 CUTCQ9NTM9 273 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 KIF17Q9P2E2 1029 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 MRPS2Q9Y399 296 aaKnown RBP12.61□□□□□ -0.39
PTCH1-215ENST00000547672 ENPP4Q9Y6X5 453 aa12.61□□□□□ -0.39
PTCH1-215ENST00000547672 EME2A4GXA9 379 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-215ENST00000547672 ZNF860A6NHJ4 632 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 WASHC1A8K0Z3 465 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 hCG_2039718K7EN88 272 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 TNFRSF11BO00300 401 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 SYT5O00445 386 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 ARHGAP33O14559 1287 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 FOXS1O43638 330 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 FESP07332 822 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 HBQ1P09105 142 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 HMGA2P52926 109 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 RPS26P62854 115 aaKnown RBP12.6□□□□□ -0.39
PTCH1-215ENST00000547672 OLR1P78380 273 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 VLDLRP98155 873 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 PPP2R2BQ00005 443 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 LARS2Q15031 903 aaKnown RBP12.6□□□□□ -0.39
PTCH1-215ENST00000547672 DEFB110Q30KQ9 67 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 ARHGAP11BQ3KRB8 267 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 ZNF628Q5EBL2 1059 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 MFSD12Q6NUT3 480 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 CARM1Q86X55 608 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 SETD9Q8NE22 299 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 OR4D9Q8NGE8 314 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 FAM110BQ8TC76 370 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 KAT2AQ92830 837 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 DGAT2Q96PD7 388 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 CSF3RQ99062 836 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 CAPN10Q9HC96 672 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 NDUFAF4Q9P032 175 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 KLHL3Q9UH77 587 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 TMCC3Q9ULS5 477 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 SATB2Q9UPW6 733 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 MYRFQ9Y2G1 1151 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 SH3GLB1Q9Y371 365 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 PCDHGA5Q9Y5G8 931 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 UNC80Q8N2C7 3258 aa12.6□□□□□ -0.39
PTCH1-215ENST00000547672 CPED1A4D0V7 1026 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 ARRDC5A6NEK1 342 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 TMEM150CB9EJG8 249 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 HS6ST1O60243 411 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 FGF17O60258 216 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 B4GALT2O60909 372 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 C1QCP02747 245 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 ALPPP05187 535 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 ZNF883P0CG24 379 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 MAN2A2P49641 1150 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 TPD52P55327 224 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-215ENST00000547672 IGLV3-21P80748 117 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-215ENST00000547672 SYPL1Q16563 259 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 ZNF750Q32MQ0 723 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 EIPR1Q53HC9 387 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 HEPHL1Q6MZM0 1159 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 UGT2A3Q6UWM9 527 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 CHERPQ8IWX8 916 aaKnown RBP12.59□□□□□ -0.39
PTCH1-215ENST00000547672 GALNT12Q8IXK2 581 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 PEX5LQ8IYB4 626 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 VWA5B2Q8N398 1253 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 ZBTB44Q8NCP5 570 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 OR7G2Q8NG99 324 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 OR51Q1Q8NH59 317 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 GIPC3Q8TF64 312 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 RIT1Q92963 219 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 ANKRD9Q96BM1 317 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-215ENST00000547672 ALOXE3Q9BYJ1 711 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 SPRTNQ9H040 489 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-215ENST00000547672 NDUFA13Q9P0J0 144 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 PDP1Q9P0J1 537 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-215ENST00000547672 ABCG2Q9UNQ0 655 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 CFL2Q9Y281 166 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 PCDHGB2Q9Y5G2 931 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 HSPE1-MOB4S4R3N1 261 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 CACNA1IQ9P0X4 2223 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 TP53BP1Q12888 1972 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-215ENST00000547672 SCN3AQ9NY46 2000 aa12.59□□□□□ -0.39
PTCH1-215ENST00000547672 DSCR3O14972 297 aa12.58□□□□□ -0.4
PTCH1-215ENST00000547672 SIGLEC6O43699 453 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms