RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 OR10H4Q8NGA5 316 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 OR4M2Q8NGB6 313 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 C2orf15Q8WU43 125 aaKnown RBP13.88□□□□□ -0.19
HOXC11-202ENST00000546378 STMN3Q9NZ72 180 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 EIF3KQ9UBQ5 218 aaKnown RBP13.88□□□□□ -0.19
HOXC11-202ENST00000546378 ZNF282Q9UDV7 671 aaPredicted RBP13.88□□□□□ -0.19
HOXC11-202ENST00000546378 INMT-MINDY4F8WBC2 141 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 FABP7O15540 132 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 OR1F1O43749 312 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 ITGA2P17301 1181 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 DGKGP49619 791 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 VSX2P58304 361 aaPredicted RBP13.88□□□□□ -0.19
HOXC11-202ENST00000546378 TPGS2Q68CL5 300 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 TUBA3EQ6PEY2 450 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 PODNL1Q6PEZ8 512 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 ZNF730Q6ZMV8 503 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 ZNF367Q7RTV3 350 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 RD3Q7Z3Z2 195 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 RASGEF1AQ8N9B8 481 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 C16orf78Q8WTQ4 265 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 MAGEB10Q96LZ2 347 aaPredicted RBP13.88□□□□□ -0.19
HOXC11-202ENST00000546378 EPYCQ99645 322 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 SLX1AQ9BQ83 275 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 CUEDC1Q9NWM3 386 aaPredicted RBP13.88□□□□□ -0.19
HOXC11-202ENST00000546378 ENPP4Q9Y6X5 453 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 SLC30A4O14863 429 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 DNAJB5O75953 348 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 IGLV3-27P01718 113 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 PTHLHP12272 177 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 APEHP13798 732 aaKnown RBP13.88□□□□□ -0.19
HOXC11-202ENST00000546378 AHRP35869 848 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 SPINT3P49223 89 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 CDC20Q12834 499 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 TMEM115Q12893 351 aaPredicted RBP13.88□□□□□ -0.19
HOXC11-202ENST00000546378 TEAD4Q15561 434 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 GPR19Q15760 415 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 ANXA8L1Q5VT79 327 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 C12orf76Q8N812 135 aaPredicted RBP13.88□□□□□ -0.19
HOXC11-202ENST00000546378 OR5AR1Q8NGP9 310 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 TM9SF4Q92544 642 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 BBS4Q96RK4 519 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 MICU1Q9BPX6 476 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 V9GYH0 126 aa13.88□□□□□ -0.19
HOXC11-202ENST00000546378 DOCK4Q8N1I0 1966 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 NPIPA5A0A0B4J1W7 369 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 ANKRD61A6NGH8 418 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 NPIPA7E9PJI5 369 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 ADH1AP07327 375 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 NPIPA8P0DM63 369 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 GRPRP30550 384 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 PSPHP78330 225 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 PCDH1Q08174 1060 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 MPEG1Q2M385 716 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 SFRP4Q6FHJ7 346 aaPredicted RBP13.87□□□□□ -0.19
HOXC11-202ENST00000546378 MACC1Q6ZN28 852 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 ATCAYQ86WG3 371 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 TMC8Q8IU68 726 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 RIT1Q92963 219 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 RAD51AP1Q96B01 352 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 C16orf58Q96GQ5 468 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 SECISBP2Q96T21 854 aaKnown RBP13.87□□□□□ -0.19
HOXC11-202ENST00000546378 SRRQ9GZT4 340 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 ABCG5Q9H222 651 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 TDP1Q9NUW8 608 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 ING3Q9NXR8 418 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 STUB1Q9UNE7 303 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 CELSR3Q9NYQ7 3312 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 EFCAB14O75071 495 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 LALBAP00709 142 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 C8GP07360 202 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 PRKAR1AP10644 381 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 CD9P21926 228 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 CCR6P51684 374 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 OR10A3P58181 314 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 FABP5Q01469 135 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 FCN2Q15485 313 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 GAREM2Q75VX8 874 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 C6orf120Q7Z4R8 191 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 FAM129CQ86XR2 697 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 ZNF433Q8N7K0 673 aaPredicted RBP13.87□□□□□ -0.19
HOXC11-202ENST00000546378 OR13C5Q8NGS8 318 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 LRRC20Q8TCA0 184 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 TCEAL4Q96EI5 215 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 RAD9AQ99638 391 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 GPA33Q99795 319 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 MGAT4AQ9UM21 535 aa13.87□□□□□ -0.19
HOXC11-202ENST00000546378 TP53BP1Q12888 1972 aaPredicted RBP13.87□□□□□ -0.19
HOXC11-202ENST00000546378 CAPN5O15484 640 aaPredicted RBP13.86□□□□□ -0.19
HOXC11-202ENST00000546378 MMP20O60882 483 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 ARHGEF15O94989 841 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 ZNF250P15622 560 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 HCCSP53701 268 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 HYAL2Q12891 473 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 PIP5KL1Q5T9C9 394 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 ANKRD54Q6NXT1 300 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 C22orf39Q6P5X5 142 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 PRSS45Q7RTY3 260 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 VWA5B2Q8N398 1253 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 CEP76Q8TAP6 659 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 ZBED6CLQ96FA7 236 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms