RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 SFXN5Q8TD22 340 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 DDX18Q9NVP1 670 aaKnown RBP16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 HCN3Q9P1Z3 774 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 TMEM131Q92545 1883 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 ADAMDEC1O15204 470 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 TPST2O60704 377 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 DPM1O60762 260 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 PIAS2O75928 621 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 DNAJB5O75953 348 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 EEF1B2P24534 225 aaKnown RBP16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 LIMS1P48059 325 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 ALDH3B2P48448 385 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 RNF144AP50876 292 aaPredicted RBP16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 PRR5P85299 388 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 IL5RAQ01344 420 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 SEC23BQ15437 767 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 ZC3H12BQ5HYM0 836 aaKnown RBP16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 C6orf141Q5SZD1 244 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 C17orf82Q86X59 251 aaPredicted RBP16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 RBM12BQ8IXT5 1001 aaKnown RBP16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 SLC25A45Q8N413 288 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 NCSTNQ92542 709 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 MYCBPQ99417 103 aaPredicted RBP16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 FSCN3Q9NQT6 498 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 PAK1IP1Q9NWT1 392 aaPredicted RBP16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 ZSCAN32Q9NX65 697 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 RNF215Q9Y6U7 377 aa16.18■□□□□ 0.18
TMEM50B-210ENST00000542230 CCDC160A6NGH7 325 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 BCAT2O15382 392 aaPredicted RBP16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 HTR1AP08908 422 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 CT62P0C5K7 136 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 ITGAMP11215 1152 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 CRHBPP24387 322 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 FMO3P31513 532 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 OR1D5P58170 312 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 HNRNPKP61978 463 aaKnown RBP eCLIP16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 PIN1Q13526 163 aaPredicted RBP16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 MICAQ29983 383 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 SLC30A8Q8IWU4 369 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 DNAJC22Q8N4W6 341 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 SLC9A6Q92581 669 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 PROX1Q92786 737 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 GTPBP3Q969Y2 492 aaKnown RBP16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 SPACA7Q96KW9 195 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 ZNF347Q96SE7 839 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 ROGDIQ9GZN7 287 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 NMNAT1Q9HAN9 279 aaPredicted RBP16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 RASSF1Q9NS23 344 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 SLC6A14Q9UN76 642 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 CLCA2Q9UQC9 943 aa16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 GPR55Q9Y2T6 319 aaPredicted RBP16.17■□□□□ 0.18
TMEM50B-210ENST00000542230 A0A087WXM4 84 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 TRIM64CA6NLI5 447 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 GADD45GO95257 159 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 NTN1O95631 604 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 TLX1P31314 330 aaPredicted RBP16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 PDX1P52945 283 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 RPP38P78345 283 aaKnown RBP16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 NPRL3Q12980 569 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 EXOSC7Q15024 291 aaKnown RBP16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 CCNJQ5T5M9 372 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 USP53Q70EK8 1073 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 VRK2Q86Y07 508 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 BPIFB6Q8NFQ5 453 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 DNASE2BQ8WZ79 361 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 CDS1Q92903 461 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 ZNF607Q96SK3 696 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 SLC38A1Q9H2H9 487 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 C3orf14Q9HBI5 128 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 LYRM4Q9HD34 91 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 TMEM9Q9P0T7 183 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 FAM32AQ9Y421 112 aaKnown RBP16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 CHST2Q9Y4C5 530 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 TMEM184BQ9Y519 407 aaPredicted RBP16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 CEPT1Q9Y6K0 416 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 CENPVL1A0A0U1RR11 272 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 CLDN24A6NM45 220 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 TGFBR3LH3BV60 316 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 M0R129 80 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 CHST10O43529 356 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 FOXS1O43638 330 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 BMP10O95393 424 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 PORP16435 677 aaPredicted RBP16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 RHCEP18577 417 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 PEX19P40855 299 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 FNTBP49356 437 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 CRISP3P54108 245 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 KCNC4Q03721 635 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 EPS8Q12929 822 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 CDK5R2Q13319 367 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 PMS2P3Q13401 168 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 RFX4Q33E94 735 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 MFSD12Q6NUT3 480 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 APLFQ8IW19 511 aaPredicted RBP16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 OR6T1Q8NGN1 323 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 MIPOL1Q8TD10 442 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 ANKRD9Q96BM1 317 aaPredicted RBP16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 ZNF354BQ96LW1 612 aa16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 NPLQ9BXD5 320 aaPredicted RBP16.16■□□□□ 0.18
TMEM50B-210ENST00000542230 ADAP2Q9NPF8 381 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms