RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 EPPINO95925 133 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 CELA3AP09093 270 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 FBXO45P0C2W1 286 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 SLC35E2P0CK97 266 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 NR2F6P10588 404 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 LSP1P33241 339 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 TIMP3P35625 211 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 NR0B1P51843 470 aaKnown RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 NRG3P56975 720 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 HERVK_113P63132 956 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 ERVK-8P63133 956 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 DDX39BQ13838 428 aaKnown RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 ZNF267Q14586 743 aaPredicted RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 NTRK2Q16620 822 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 FAM83EQ2M2I3 478 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 CCDC153Q494R4 210 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 C10orf62Q5T681 223 aaPredicted RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 HLA-DQA1Q5Y7H0 255 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 KLC3Q6P597 504 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 WDR53Q7Z5U6 358 aaPredicted RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 PACS2Q86VP3 889 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 LCA5Q86VQ0 697 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 MYLK4Q86YV6 388 aaPredicted RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 NUDCD3Q8IVD9 361 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 OR4N5Q8IXE1 308 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 ULK2Q8IYT8 1036 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 TEX9Q8N6V9 391 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 KCTD4Q8WVF5 259 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 CKAP2Q8WWK9 683 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 SREK1Q8WXA9 508 aaKnown RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 PPWD1Q96BP3 646 aaKnown RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 NXNL1Q96CM4 212 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 ZNF597Q96LX8 424 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 MAGEB18Q96M61 343 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 GAL3ST4Q96RP7 486 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 DOHHQ9BU89 302 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 ERVK-6Q9BXR3 956 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 POLDIP3Q9BY77 421 aaKnown RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 WWTR1Q9GZV5 400 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 CXXC4Q9H2H0 198 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 DDX31Q9H8H2 851 aaKnown RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 ACTR8Q9H981 624 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 SEMA4BQ9NPR2 832 aaPredicted RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 DMRT3Q9NQL9 472 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 ZNF629Q9UEG4 869 aaPredicted RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 ERVK-19Q9WJR5 959 aa7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 CHCHD2Q9Y6H1 151 aaPredicted RBP7.72□□□□□ -1.17
RPUSD4-209ENST00000534393 MED12Q93074 2177 aa7.71□□□□□ -1.17
RPUSD4-209ENST00000534393 FLNAP21333 2647 aaKnown RBP7.71□□□□□ -1.17
RPUSD4-209ENST00000534393 C2orf92A0A1B0GVN3 265 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 UBXN8O00124 270 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 FOXE1O00358 373 aaPredicted RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 BIRC5O15392 142 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 PLIN3O60664 434 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 SHOX2O60902 331 aaPredicted RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 GUCY1B2O75343 617 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 SH3BGRLO75368 114 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 GOSR1O95249 250 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 NADKO95544 446 aaPredicted RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 IL2RAP01589 272 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 PROCP04070 461 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 VIMP08670 466 aaKnown RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 RFPL3SP0C7P2 107 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 FAM58BPP0C7Q3 252 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 GFAPP14136 432 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 CD99P14209 185 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 CPA3P15088 417 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 ENDOUP21128 410 aaKnown RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 DNASE1P24855 282 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 GDF1P27539 372 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 PIK3R1P27986 724 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 UQCRC1P31930 480 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 ADH7P40394 386 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 ETV4P43268 484 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 SERPINB4P48594 390 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 ASCL1P50553 236 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 IST1P53990 364 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 SEC24CP53992 1094 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 ALDH18A1P54886 795 aaKnown RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 HNRNPH2P55795 449 aaKnown RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 DLX5P56178 289 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 SLC37A1P57057 533 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 RPS13P62277 151 aaKnown RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 GABPB1Q06547 395 aaPredicted RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 SETDB1Q15047 1291 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 ACAP2Q15057 778 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 EBPQ15125 230 aaKnown RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 RPS6KA2Q15349 733 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 TSNAXIP1Q2TAA8 658 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 FBXL19-AS1Q494R0 122 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 FLYWCH1Q4VC44 716 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 C6orf163Q5TEZ5 329 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 PRAMEF20Q5VT98 475 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 C18orf63Q68DL7 685 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 OR52E8Q6IFG1 317 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 MRM1Q6IN84 353 aaKnown RBP7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 LYPD8Q6UX82 237 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 NUDT13Q86X67 352 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 KIF18BQ86Y91 864 aa7.71□□□□□ -1.18
RPUSD4-209ENST00000534393 LACC1Q8IV20 430 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms