RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 LCLAT1Q6UWP7 414 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 ADAMTSL5Q6ZMM2 481 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 GDPGP1Q6ZNW5 385 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 GPBP1Q86WP2 473 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 ZDHHC21Q8IVQ6 265 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 CCDC36Q8IYA8 594 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 CENPLQ8N0S6 344 aaPredicted RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 PYROXD2Q8N2H3 581 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 FAM133AQ8N9E0 248 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 DENND6BQ8NEG7 585 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 OR52M1Q8NGK5 317 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 OR10T2Q8NGX3 314 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 FBXO30Q8TB52 745 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 SSC4DQ8WTU2 575 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 SLC5A11Q8WWX8 675 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 ZNF606Q8WXB4 792 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 OSTF1Q92882 214 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 NABP1Q96AH0 204 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 CASD1Q96PB1 797 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 RCHY1Q96PM5 261 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 ALKBH3Q96Q83 286 aaPredicted RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 TNFRSF13CQ96RJ3 184 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 CPXM1Q96SM3 734 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 TMEM117Q9H0C3 514 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 PARLQ9H300 379 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 LIME1Q9H400 295 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 ALG9Q9H6U8 611 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 DCTPP1Q9H773 170 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 KAT8Q9H7Z6 458 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 Q9HAA7 133 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 B3GAT2Q9NPZ5 323 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.48□□□□□ -2.01
CD44-234ENST00000531873 GDAP2Q9NXN4 497 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 GPR83Q9NYM4 423 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 GTSE1Q9NYZ3 720 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 THAP10Q9P2Z0 257 aaPredicted RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 PURGQ9UJV8 347 aaKnown RBP2.48□□□□□ -2.01
CD44-234ENST00000531873 GAB2Q9UQC2 676 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 KIF3AQ9Y496 699 aa2.48□□□□□ -2.01
CD44-234ENST00000531873 SF3B1O75533 1304 aaKnown RBP eCLIP2.47□□□□□ -2.01
CD44-234ENST00000531873 LOC105371242A0A075B767 164 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 LRRC30A6NM36 301 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 TMCO5BA8MYB1 307 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 PRSS44E7EML9 344 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 NEDD8-MDP1E9PL57 170 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 E2F3O00716 465 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 SNAP91O60641 907 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 FRAT2O75474 233 aaPredicted RBP2.47□□□□□ -2.01
CD44-234ENST00000531873 MBD3O95983 291 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 IGLV1-44P01699 117 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 IGHG3P01860 377 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 ANXA4P09525 319 aaPredicted RBP2.47□□□□□ -2.01
CD44-234ENST00000531873 CLUP10909 449 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 TSPAN8P19075 237 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 TNNI3P19429 210 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 CYLC1P35663 651 aaPredicted RBP2.47□□□□□ -2.01
CD44-234ENST00000531873 DLSTP36957 453 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 PGFP49763 221 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 HERVK_113P63132 956 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 ERVK-8P63133 956 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 TMEM30BQ3MIR4 351 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 SLC36A3Q495N2 470 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 ZFP69Q49AA0 526 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 NADK2Q4G0N4 442 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 DDI2Q5TDH0 399 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 BSPRYQ5W0U4 402 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 NCR3LG1Q68D85 454 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 DMKNQ6E0U4 476 aaPredicted RBP2.47□□□□□ -2.01
CD44-234ENST00000531873 ASPHD2Q6ICH7 369 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 LEG1Q6P5S2 330 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 LRRC8BQ6P9F7 803 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 ATRAIDQ6UW56 229 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 NUFIP2Q7Z417 695 aaKnown RBP2.47□□□□□ -2.01
CD44-234ENST00000531873 RANBP3LQ86VV4 465 aaPredicted RBP2.47□□□□□ -2.01
CD44-234ENST00000531873 CBWD2Q8IUF1 395 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 EFCAB13Q8IY85 973 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 SPEM1Q8N4L4 309 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 ICA1LQ8NDH6 482 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 OR4F17Q8NGA8 305 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 OR52B6Q8NGF0 335 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 FBXO25Q8TCJ0 367 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 ADIPOR1Q96A54 375 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 NTNG2Q96CW9 530 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 VSTM2LQ96N03 204 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 VPS35Q96QK1 796 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 OR4F4Q96R69 305 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 MYCBPQ99417 103 aaPredicted RBP2.47□□□□□ -2.01
CD44-234ENST00000531873 APOOQ9BUR5 198 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 ST6GALNAC5Q9BVH7 336 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 ERVK-6Q9BXR3 956 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 NT5C3AQ9H0P0 336 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 NT5DC2Q9H857 520 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 RMND5AQ9H871 391 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 WDR41Q9HAD4 459 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 TRPV5Q9NQA5 729 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 ZNF446Q9NWS9 450 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 NDE1Q9NXR1 346 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 ATP6V1HQ9UI12 483 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 XPO7Q9UIA9 1087 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms