RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 NDRG2Q9UN36 371 aaKnown RBP11.84□□□□□ -0.51
CAPN1-208ENST00000527323 SLC28A2O43868 658 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 ALPPP05187 535 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 TYRP14679 529 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 ERP29P30040 261 aaKnown RBP11.83□□□□□ -0.52
CAPN1-208ENST00000527323 PNLIPRP1P54315 467 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 CNTN1Q12860 1018 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 PDE7AQ13946 482 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 NFE2L1Q14494 772 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 GPR19Q15760 415 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 TMEM201Q5SNT2 666 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 MZT2BQ6NZ67 158 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 PEX5LQ8IYB4 626 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 Q8N402 240 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 OR52P1PQ8NH57 321 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 PHOSPHO2Q8TCD6 241 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 BTN2A2Q8WVV5 523 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 PDXPQ96GD0 296 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 MSLNLQ96KJ4 702 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 GFM1Q96RP9 751 aaKnown RBP11.83□□□□□ -0.52
CAPN1-208ENST00000527323 CPEB1Q9BZB8 566 aaKnown RBP11.83□□□□□ -0.52
CAPN1-208ENST00000527323 TAAR2Q9P1P5 351 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 NLKQ9UBE8 527 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 MSRAQ9UJ68 235 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 GPSM3Q9Y4H4 160 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 A0A0B4J293 547 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 FOXE1O00358 373 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-208ENST00000527323 QSOX1O00391 747 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 METAP1P53582 386 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 BNC1Q01954 994 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 UBE3AQ05086 875 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 FAPQ12884 760 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 IL18Q14116 193 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 FAM78AQ5JUQ0 283 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 LYPD8Q6UX82 237 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 UNC5DQ6UXZ4 953 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 HMGN2P46Q86SG4 172 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 SLC7A13Q8TCU3 470 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 SNAPC3Q92966 411 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 RNF31Q96EP0 1072 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 DHRS1Q96LJ7 313 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 FNDC11Q9BVV2 318 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 SPNS1Q9H2V7 528 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 MVB12BQ9H7P6 319 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 TRIM45Q9H8W5 580 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-208ENST00000527323 C5AR2Q9P296 337 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 TEKT2Q9UIF3 430 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 DOCK9Q9BZ29 2069 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 VIPR1P32241 457 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 RAB25P57735 213 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 SMIM11AP58511 58 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 GPLD1P80108 840 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 OCLNQ16625 522 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.83□□□□□ -0.52
CAPN1-208ENST00000527323 SHFQ7M4L6 423 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 TRMT11Q7Z4G4 463 aaKnown RBP11.83□□□□□ -0.52
CAPN1-208ENST00000527323 MEX3DQ86XN8 651 aaKnown RBP11.83□□□□□ -0.52
CAPN1-208ENST00000527323 XAGE5Q8WWM1 108 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 DEDD2Q8WXF8 326 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 VOPP1Q96AW1 172 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 KATNB1Q9BVA0 655 aa11.83□□□□□ -0.52
CAPN1-208ENST00000527323 DIMT1Q9UNQ2 313 aaKnown RBP11.83□□□□□ -0.52
CAPN1-208ENST00000527323 NCOR1O75376 2440 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-208ENST00000527323 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ANHXE9PGG2 379 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 RTCAO00442 366 aaKnown RBP11.82□□□□□ -0.52
CAPN1-208ENST00000527323 NPC1O15118 1278 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 SEMA7AO75326 666 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 PRKAR1AP10644 381 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 CPEP16870 476 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF30P17039 623 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 GIPRP48546 466 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 WNT4P56705 351 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 EFR3AQ14156 821 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 WSCD2Q2TBF2 565 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 KLHL22Q53GT1 634 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 TMEM215Q68D42 235 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 TANGO2Q6ICL3 276 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ACSM5Q6NUN0 579 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 PODNL1Q6PEZ8 512 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 CNIH2Q6PI25 160 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 C6orf120Q7Z4R8 191 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 TRAM1L1Q8N609 369 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 NLGN4YQ8NFZ3 816 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF607Q96SK3 696 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 GDF15Q99988 308 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 WFDC6Q9BQY6 131 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 GON7Q9BXV9 100 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ACOXLQ9NUZ1 547 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 TRPC4Q9UBN4 977 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 HS3ST2Q9Y278 367 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ALG5Q9Y673 324 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 SLC5A10A0PJK1 596 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ERVH48-1M5A8F1 160 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 C1orf105O95561 183 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 LGI1O95970 557 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 CPN2P22792 545 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ERVK-21P61565 698 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 BTBD16Q32M84 506 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms