RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 HSPBAP1Q96EW2 488 aa19.27■□□□□ 0.68
TRAPPC9-215ENST00000524162 EBPLQ9BY08 206 aa19.27■□□□□ 0.68
TRAPPC9-215ENST00000524162 MIEF1Q9NQG6 463 aa19.27■□□□□ 0.68
TRAPPC9-215ENST00000524162 DEPPQ9NTK1 212 aa19.27■□□□□ 0.68
TRAPPC9-215ENST00000524162 OSGIN2Q9Y236 505 aa19.27■□□□□ 0.68
TRAPPC9-215ENST00000524162 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC9-215ENST00000524162 A0A087WV62 115 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 TMEM114B3SHH9 223 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 GLSO94925 669 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 CBX7O95931 251 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 P04436 131 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 SERPINE1P05121 402 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 DRD5P21918 477 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 DUSP2Q05923 314 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 C2orf80Q0P641 193 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 XKR7Q5GH72 579 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 SH2D4BQ5SQS7 431 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 MTFR2Q6P444 385 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 TMEM81Q6P7N7 255 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 FBXW8Q8N3Y1 598 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 OR2T11Q8NH01 316 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 PPP3R2Q96LZ3 170 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 BRINP2Q9C0B6 783 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 ZDHHC11Q9H8X9 412 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 NPFFR2Q9Y5X5 522 aa19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 CHCHD2Q9Y6H1 151 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC9-215ENST00000524162 CENPEQ02224 2701 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 NCOA6Q14686 2063 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 NPIPA5E9PKD4 350 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 ACOT7O00154 380 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 PLOD2O00469 737 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 TP53I11O14683 189 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 TFECO14948 347 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 TO15178 435 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 SLC19A2O60779 497 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 ARRB2P32121 409 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 CA7P43166 264 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 PPICP45877 212 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 ASMTP46597 345 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 NR0B1P51843 470 aaKnown RBP19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 KCNK10P57789 538 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 SRSF11Q05519 484 aaKnown RBP19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 RPS6KA2Q15349 733 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 FAM111BQ6SJ93 734 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 ZCCHC23Q6ZST2 131 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 SLC22A16Q86VW1 577 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 CCDC116Q8IYX3 515 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 FAM9CQ8IZT9 166 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 EXOSC8Q96B26 276 aaKnown RBP19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 MTERF3Q96E29 417 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 IL1RL2Q9HB29 575 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 HAO1Q9UJM8 370 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 NPIPA1Q9UND3 350 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 EXO1Q9UQ84 846 aaKnown RBP19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 POLR3HQ9Y535 204 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 FREM3P0C091 2139 aa19.25■□□□□ 0.67
TRAPPC9-215ENST00000524162 CCL3P10147 92 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 DDX5P17844 614 aaKnown RBP19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 EMDP50402 254 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 RPP38P78345 283 aaKnown RBP19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 FOXO1Q12778 655 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 SMU1Q2TAY7 513 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 RFTN2Q52LD8 501 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 TRMT12Q53H54 448 aaKnown RBP19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 PAOXQ6QHF9 649 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 TICAM1Q8IUC6 712 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 SPPL2CQ8IUH8 684 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 NTNG2Q96CW9 530 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 LCORQ96JN0 433 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 BTBD9Q96Q07 612 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 BBS4Q96RK4 519 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 CENPHQ9H3R5 247 aa19.24■□□□□ 0.67
TRAPPC9-215ENST00000524162 PIP5K1BO14986 540 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 LRRTM2O43300 516 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 LINC00032P0C843 101 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 PCSK2P16519 638 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 SDC1P18827 310 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 MAPK1P28482 360 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 CASP6P55212 293 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 GPR85P60893 370 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 DUSP8Q13202 625 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 PDE7AQ13946 482 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 MPP2Q14168 576 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 CMPK2Q5EBM0 449 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 FAM47EQ6ZV65 393 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 CHERPQ8IWX8 916 aaKnown RBP19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 DDIASQ8IXT1 998 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 ADCY4Q8NFM4 1077 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 PPP1R14CQ8TAE6 165 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 DOK4Q8TEW6 326 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 MAGED4Q96JG8 741 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 QPCTLQ9NXS2 382 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 BCAP29Q9UHQ4 241 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 ZDHHC2Q9UIJ5 367 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 CNOT11Q9UKZ1 510 aaKnown RBP19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 GPR55Q9Y2T6 319 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 PTGDR2Q9Y5Y4 395 aa19.23■□□□□ 0.67
TRAPPC9-215ENST00000524162 NUP214P35658 2090 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC9-215ENST00000524162 FRG2CA6NGY1 282 aa19.22■□□□□ 0.67
TRAPPC9-215ENST00000524162 TMEM233B4DJY2 109 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms