RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, human

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-215	ENST00000522963	PSMA8	Q8TAA3	256 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	ZNF675	Q8TD23	568 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	CTHRC1	Q96CG8	243 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	RCN3	Q96D15	328 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	ITCH	Q96J02	903 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	PANX1	Q96RD7	426 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	PAIP1	Q9H074	479 aa	Known RBP	11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	ZNF700	Q9H0M5	742 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	ZNF160	Q9HCG1	818 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	SLC6A13	Q9NSD5	602 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	TAS2R9	Q9NYW1	312 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	SLAMF8	Q9P0V8	285 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	MAP10	Q9P2G4	905 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	TAGLN3	Q9UI15	199 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	ZNF639	Q9UID6	485 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	NBEA	Q8NFP9	2946 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963		A0A096LPI6	279 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	IGHV1-45	A0A0A0MS14	117 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	NSG1	A0A0A6YYJ2	146 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963		A0A1W2PQ72	361 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	SAGE2P	A6NJ88	616 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	PLOD2	O00469	737 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	RFXANK	O14593	260 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	MRAS	O14807	208 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	C1QL1	O75973	258 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	SEC24D	O94855	1032 aa	Predicted RBP	11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	UBOX5	O94941	541 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	DDAH2	O95865	285 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	GSN	P06396	782 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	T-ENOL	P0DO92	83 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	COX6A1	P12074	109 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	HOXB9	P17482	250 aa	Predicted RBP	11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	PTPN6	P29350	595 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	TRPC1	P48995	793 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	MRPS35	P82673	323 aa	Known RBP	11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	C19orf57	Q0VDD7	668 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	DUSP8	Q13202	625 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	ZNF267	Q14586	743 aa	Predicted RBP	11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	MMEL1	Q495T6	779 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	TRMT12	Q53H54	448 aa	Known RBP	11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	COQ5	Q5HYK3	327 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	C6orf10	Q5SRN2	563 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	FHL5	Q5TD97	284 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	IRAK1BP1	Q5VVH5	260 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	DLEU7	Q6UYE1	221 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	ASB18	Q6ZVZ8	466 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	CLEC4F	Q8N1N0	589 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	VWA5B2	Q8N398	1253 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	GALNT16	Q8N428	558 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	ZNF843	Q8N446	348 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	ZNF321P	Q8N8H1	164 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	SIMC1	Q8NDZ2	872 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	NFAM1	Q8NET5	270 aa	Predicted RBP	11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	OR14A16	Q8NHC5	309 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	DAZL	Q92904	295 aa	Known RBP	11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	NACC2	Q96BF6	587 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	ELP4	Q96EB1	424 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	SENP5	Q96HI0	755 aa	Predicted RBP	11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	NSL1	Q96IY1	281 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	MAGED4	Q96JG8	741 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	LPAR4	Q99677	370 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	CNPPD1	Q9BV87	410 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	ANKRA2	Q9H9E1	313 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	NEUROD4	Q9HD90	331 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	GPR83	Q9NYM4	423 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	TUBD1	Q9UJT1	453 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	PCDHGB4	Q9UN71	923 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	ERVK-19	Q9WJR5	959 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	SNX8	Q9Y5X2	465 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	CLCA3P	Q9Y6N3	262 aa		11.1	□□□□□ -0.63
PVT1-215	ENST00000522963	TLN1	Q9Y490	2541 aa	Known RBP	11.09	□□□□□ -0.63
PVT1-215	ENST00000522963		A0A087WV62	115 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	UPK1A	O00322	258 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	AIM2	O14862	343 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	PLOD3	O60568	738 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	SLITRK5	O94991	958 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	KCNH1	O95259	989 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	CBX7	O95931	251 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	HP	P00738	406 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	C1QC	P02747	245 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	CLPS	P04118	112 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	ZCCHC18	P0CG32	403 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	SSTR4	P31391	388 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	SOAT1	P35610	550 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	GPR143	P51810	404 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	SLC26A5	P58743	744 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	FUT7	Q11130	342 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	AIMP2	Q13155	320 aa	Known RBP	11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	GAB1	Q13480	694 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	NFYC	Q13952	458 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	EXOSC7	Q15024	291 aa	Known RBP	11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	LRIF1	Q5T3J3	769 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	C6orf163	Q5TEZ5	329 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	TCTN3	Q6NUS6	607 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	TMEM64	Q6YI46	380 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	ZNF621	Q6ZSS3	439 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	NDUFAF7	Q7L592	441 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	PRICKLE2	Q7Z3G6	844 aa		11.09	□□□□□ -0.63
PVT1-215	ENST00000522963	DHDDS	Q86SQ9	333 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms