RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SERPINE1P05121 402 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 STSP08842 583 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 GALNTL6Q49A17 601 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 XKR7Q5GH72 579 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 TMEM64Q6YI46 380 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 C17orf47Q8NEP4 570 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 OR2M7Q8NG81 312 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 SSC4DQ8WTU2 575 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 KAT2AQ92830 837 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 BBS4Q96RK4 519 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 STMN4Q9H169 189 aaPredicted RBP19.04■□□□□ 0.64
TRIM35-203ENST00000521253 ZNF395Q9H8N7 513 aaPredicted RBP19.04■□□□□ 0.64
TRIM35-203ENST00000521253 SACM1LQ9NTJ5 587 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 RYDENQ9NUL5 291 aaKnown RBP19.04■□□□□ 0.64
TRIM35-203ENST00000521253 TAS2R7Q9NYW3 318 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 CFL2Q9Y281 166 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 MYO1GB0I1T2 1018 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 TFECO14948 347 aaPredicted RBP19.03■□□□□ 0.64
TRIM35-203ENST00000521253 ASNA1O43681 348 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 HSPA4LO95757 839 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 P04436 131 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 SDC1P18827 310 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 CNR1P21554 472 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 MPIP34949 423 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 C4orf17Q53FE4 359 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 DND1Q8IYX4 353 aaKnown RBP19.03■□□□□ 0.64
TRIM35-203ENST00000521253 OR10G3Q8NGC4 313 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 PAQR8Q8TEZ7 354 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 C3orf30Q96M34 536 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 CCT7Q99832 543 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 FAM173AQ9BQD7 235 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 ITPAQ9BY32 194 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 NXF5Q9H1B4 397 aaKnown RBP19.03■□□□□ 0.64
TRIM35-203ENST00000521253 ANKRA2Q9H9E1 313 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 GIMAP2Q9UG22 337 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 TMED5Q9Y3A6 229 aa19.03■□□□□ 0.64
TRIM35-203ENST00000521253 DOPEY1Q5JWR5 2465 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 TMEM114B3SHH9 223 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 LRRTM2O43300 516 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 HS6ST1O60243 411 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 SKAP2O75563 359 aaPredicted RBP19.02■□□□□ 0.64
TRIM35-203ENST00000521253 DNASE1L1P49184 302 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 EMDP50402 254 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 ABCE1P61221 599 aaKnown RBP19.02■□□□□ 0.64
TRIM35-203ENST00000521253 RBPJQ06330 500 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 NNATQ16517 81 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 NTRK2Q16620 822 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 C1QL3Q5VWW1 255 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 SLC22A10Q63ZE4 541 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 FAM47EQ6ZV65 393 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 FAM9CQ8IZT9 166 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 ANKRD42Q8N9B4 389 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 FAM13CQ8NE31 585 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 OR5M3Q8NGP4 307 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 GFM2Q969S9 779 aaKnown RBP19.02■□□□□ 0.64
TRIM35-203ENST00000521253 ERP27Q96DN0 273 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 PPP3R2Q96LZ3 170 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 TSSK3Q96PN8 268 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 C20orf27Q9GZN8 174 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 PRODH2Q9UF12 536 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 BAIAP2L1Q9UHR4 511 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 NPFFR2Q9Y5X5 522 aa19.02■□□□□ 0.64
TRIM35-203ENST00000521253 CHCHD2Q9Y6H1 151 aaPredicted RBP19.02■□□□□ 0.64
TRIM35-203ENST00000521253 ATP6AP2A0A1C7CYW4 349 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 ATP6AP2O75787 350 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 LDLRP01130 860 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 JUNP05412 331 aaKnown RBP19.01■□□□□ 0.63
TRIM35-203ENST00000521253 BGNP21810 368 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 PIGAP37287 484 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 NCBP2P52298 156 aaKnown RBP eCLIP19.01■□□□□ 0.63
TRIM35-203ENST00000521253 NRG3P56975 720 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 HSF1Q00613 529 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 PLGLB1Q02325 96 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 CASP8Q14790 479 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 GK5Q6ZS86 529 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 GHDCQ8N2G8 530 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 ZNF781Q8N8C0 355 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 OR7G2Q8NG99 324 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 CLHC1Q8NHS4 586 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 PAIP2Q9BPZ3 127 aaKnown RBP19.01■□□□□ 0.63
TRIM35-203ENST00000521253 TTTY12Q9BZ98 90 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 TMBIM4Q9HC24 238 aa19.01■□□□□ 0.63
TRIM35-203ENST00000521253 TRGV8A0A0C4DH27 118 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 TMEM120BA0PK00 339 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 WIPF3A6NGB9 483 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 FAM166BA8MTA8 275 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 CAPN14A8MX76 684 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 AKAP10O43572 662 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 PLOD3O60568 738 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 SLC19A2O60779 497 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 PEX11AO75192 247 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 NME6O75414 186 aaPredicted RBP19■□□□□ 0.63
TRIM35-203ENST00000521253 BCAS2O75934 225 aaPredicted RBP19■□□□□ 0.63
TRIM35-203ENST00000521253 GLSO94925 669 aaPredicted RBP19■□□□□ 0.63
TRIM35-203ENST00000521253 LRATO95237 230 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 BCKDHAP12694 445 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 GRK2P25098 689 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 ABCD3P28288 659 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 NTSP30990 170 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 WDR4P57081 412 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms