RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 P4HA3Q7Z4N8 544 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 AGAP4Q96P64 663 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 RCHY1Q96PM5 261 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 VPS35Q96QK1 796 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 TNFRSF13CQ96RJ3 184 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 LRRCC1Q9C099 1032 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 KAT8Q9H7Z6 458 aaKnown RBP4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 NT5DC2Q9H857 520 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 POLD4Q9HCU8 107 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 TRPV5Q9NQA5 729 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 DEPPQ9NTK1 212 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 GDAP2Q9NXN4 497 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 EMCNQ9ULC0 261 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 FZR1Q9UM11 496 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 LRP12Q9Y561 859 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 FKBP7Q9Y680 259 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 PRR23AA6NEV1 266 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 IGLON5A6NGN9 336 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 RNF212BA8MTL3 300 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 WASH3PC4AMC7 463 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 ALOX15BO15296 676 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 DUSP11O75319 330 aaKnown RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 TOXO94900 526 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 ECDO95905 644 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 IGHG1P01857 330 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 ASNSP08243 561 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZSCAN5DPP0CG00 497 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 EPB41P11171 864 aaKnown RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 OTX2P32243 289 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 TRIM23P36406 574 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 SRPXP78539 464 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 FKBP3Q00688 224 aaKnown RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 SRYQ05066 204 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 CALCOCO2Q13137 446 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 HNRNPA0Q13151 305 aaKnown RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 TMEM187Q14656 261 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZKSCAN8Q15776 578 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 MS4A18Q3C1V0 323 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 KRTAP24-1Q3LI83 254 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 SLC36A3Q495N2 470 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 UNC50Q53HI1 259 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 TCHHL1Q5QJ38 904 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 MUC21Q5SSG8 566 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 AGAP7PQ5VUJ5 663 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 WDR25Q64LD2 544 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 DMKNQ6E0U4 476 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 CBLN3Q6UW01 205 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 WASH2PQ6VEQ5 465 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 MOB2Q70IA6 237 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 NUFIP2Q7Z417 695 aaKnown RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 NET1Q7Z628 596 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 KCNMB4Q86W47 210 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 CCDC36Q8IYA8 594 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 NFAM1Q8NET5 270 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 C11orf45Q8TAV5 145 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 DLX4Q92988 240 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 ART5Q96L15 291 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 VSTM2LQ96N03 204 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 GPR174Q9BXC1 333 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 TEX13BQ9BXU2 312 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 STRADBQ9C0K7 418 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 ALG9Q9H6U8 611 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 MOB1AQ9H8S9 216 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 LPAR2Q9HBW0 351 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 NRN1Q9NPD7 142 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 GPR83Q9NYM4 423 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 MBD2Q9UBB5 411 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 EIF3KQ9UBQ5 218 aaKnown RBP4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 B9D1Q9UPM9 204 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 SLC9A8Q9Y2E8 581 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 WDR81Q562E7 1941 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 ATAD2BQ9ULI0 1458 aa4.42□□□□□ -1.7
HMGB1P46-201ENST00000520062 PARD3Q8TEW0 1356 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 IGLV7-46A0A075B6I9 117 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 MEX3AA1L020 520 aaKnown RBP4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 ARHGEF33A8MVX0 844 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 NPIPA2E9PIF3 369 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 EI24O14681 340 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 TBX19O60806 448 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 IGHDP01880 384 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 ANXA4P09525 319 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 HNRNPA2B1P22626 353 aaKnown RBP4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 ACADVLP49748 655 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 MRPS6P82932 125 aaKnown RBP4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 IL9RQ01113 521 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZP4Q12836 540 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZNF146Q15072 292 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 TPD52L1Q16890 204 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 NADK2Q4G0N4 442 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZNF562Q6V9R5 426 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 CENPUQ71F23 418 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 ERASQ7Z444 233 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 LHFPL4Q7Z7J7 247 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 FAM131BQ86XD5 332 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZNF781Q8N8C0 355 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 BANPQ8N9N5 519 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 OR1B1Q8NGR6 318 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 DNASE2BQ8WZ79 361 aa4.41□□□□□ -1.7
HMGB1P46-201ENST00000520062 NABP1Q96AH0 204 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms