RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 KLK10O43240 276 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 PRAMEF2O60811 474 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 HNRNPCL1O60812 293 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 COQ9O75208 318 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 ABCB1P08183 1280 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 T-ENOLP0DO92 83 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 TNNI3P19429 210 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 PPIBP23284 216 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 OTX2P32243 289 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 GPC1P35052 558 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 MAP3K8P41279 467 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 MC3RP41968 323 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 CDKN2CP42773 168 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 CCT3P49368 545 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 UCNP55089 124 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 SLC37A1P57057 533 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 PSPHP78330 225 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 VAC14Q08AM6 782 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 MMEL1Q495T6 779 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 TRMT12Q53H54 448 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 FAAH2Q6GMR7 532 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 FAM111BQ6SJ93 734 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 TMEM107Q6UX40 140 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 GPR155Q7Z3F1 870 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 DHDDSQ86SQ9 333 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 POU5F2Q8N7G0 328 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 C17orf47Q8NEP4 570 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 ADCY4Q8NFM4 1077 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 MIPOL1Q8TD10 442 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 ELP5Q8TE02 316 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 C8orf44Q96CB5 159 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 RCN3Q96D15 328 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 NEURL3Q96EH8 262 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 FAM120BQ96EK7 910 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 INPP5KQ9BT40 448 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 MMP25Q9NPA2 562 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 GIN1Q9NXP7 522 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 COPS7AQ9UBW8 275 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 CFL2Q9Y281 166 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 PCDHB14Q9Y5E9 798 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 EXPH5Q8NEV8 1989 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 NSG1A0A0A6YYJ2 146 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 MYOCOSA0A1B0GUC4 107 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 EFSO43281 561 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 SEC24DO94855 1032 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 CPSF4O95639 269 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 KRT75O95678 551 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 ESRRAP11474 423 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 WT1P19544 449 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 EFNA1P20827 205 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 EMDP50402 254 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 MRPS35P82673 323 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 EEF1A2Q05639 463 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 CDC20Q12834 499 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 BNIP1Q12981 228 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 CHAF1BQ13112 559 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 GAB1Q13480 694 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 ZNF267Q14586 743 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 MYBPC3Q14896 1274 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 DCAF10Q5QP82 559 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 C6orf10Q5SRN2 563 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 SAXO2Q658L1 398 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 H3F3CQ6NXT2 135 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 JMJD6Q6NYC1 403 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 SPACA3Q8IXA5 215 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 MSRB3Q8IXL7 192 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 TMEM102Q8N9M5 508 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 ZSCAN1Q8NBB4 408 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 ZFP90Q8TF47 636 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 SNRNP27Q8WVK2 155 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 KAT2AQ92830 837 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 LRRC58Q96CX6 371 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 GIMAP5Q96F15 307 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 FER1L6-AS2Q96M78 137 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 ANKRD27Q96NW4 1050 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 MS4A4EQ96PG1 132 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 CGREF1Q99674 301 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 HOPXQ9BPY8 73 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 MESP1Q9BRJ9 268 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 GPATCH1Q9BRR8 931 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 NUDT9Q9BW91 350 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 OR10A5Q9H207 317 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 C1orf21Q9H246 121 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 SLC6A13Q9NSD5 602 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 DDX18Q9NVP1 670 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 GPATCH2Q9NW75 528 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 NDE1Q9NXR1 346 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 SLC25A37Q9NYZ2 338 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 VAPAQ9P0L0 249 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 PRODH2Q9UF12 536 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 FBXL4Q9UKA2 621 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 CORO2BQ9UQ03 480 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 ERVK-19Q9WJR5 959 aa11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 FLNBO75369 2602 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-220ENST00000514830 C15orf38-AP3S2A0A0A6YYH1 394 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 IGHV3-20A0A0C4DH32 117 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 RNF103-CHMP3A0A140T963 221 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 A8MUA0 341 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 HRKO00198 91 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms