RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 C8orf46Q8TAG6 207 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 FAM151AQ8WW52 585 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 LIPHQ8WWY8 451 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 DTD2Q96FN9 168 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 AGPAT1Q99943 283 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 MCRIP2Q9BUT9 160 aaKnown RBP4.96□□□□□ -1.62
HERC4-213ENST00000506515 NUSAP1Q9BXS6 441 aaKnown RBP4.96□□□□□ -1.62
HERC4-213ENST00000506515 TDRD3Q9H7E2 651 aaKnown RBP4.96□□□□□ -1.62
HERC4-213ENST00000506515 NDE1Q9NXR1 346 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 LAMB1P07942 1786 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 LAMB2P55268 1798 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 UMODL1Q5DID0 1318 aa4.96□□□□□ -1.62
HERC4-213ENST00000506515 VCANP13611 3396 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 SHISA7A6NL88 538 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 IDH3BO43837 385 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 HSF2BPO75031 334 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 NXPH4O95158 308 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 AREGP15514 252 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 CYP3A5P20815 502 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 GPX3P22352 226 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 CCR4P51679 360 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 NDST2P52849 883 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 ERVK11-1P61568 191 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 ERVK-16P61578 105 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 RBBP4Q09028 425 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 KIAA0141Q14154 515 aaPredicted RBP4.95□□□□□ -1.62
HERC4-213ENST00000506515 WSCD2Q2TBF2 565 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 TRIM65Q6PJ69 517 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 C3P1Q6ZMU1 363 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 GDPGP1Q6ZNW5 385 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 CHCHD4Q8N4Q1 142 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 GPATCH11Q8N954 259 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 URGCPQ8TCY9 931 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 PCED1BQ96HM7 432 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 C18orf12Q96KH6 178 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 IWS1Q96ST2 819 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 NAP1L3Q99457 506 aaPredicted RBP4.95□□□□□ -1.62
HERC4-213ENST00000506515 S1PR3Q99500 378 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 PLEKHA3Q9HB20 300 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 IL1RAPQ9NPH3 570 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 DDX28Q9NUL7 540 aaKnown RBP4.95□□□□□ -1.62
HERC4-213ENST00000506515 NDUFA13Q9P0J0 144 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 UBQLN2Q9UHD9 624 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 TRMT6Q9UJA5 497 aaKnown RBP4.95□□□□□ -1.62
HERC4-213ENST00000506515 ECM29Q5VYK3 1845 aa4.95□□□□□ -1.62
HERC4-213ENST00000506515 AK9Q5TCS8 1911 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 IGHV3-20A0A0C4DH32 117 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 CCDC69A6NI79 296 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 CCSO14618 274 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 CSO75390 466 aaKnown RBP4.94□□□□□ -1.62
HERC4-213ENST00000506515 CXCL14O95715 111 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 TRIM49P0CI25 452 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 TRIM49CP0CI26 452 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 TPBGLP0DKB5 382 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 CD1DP15813 335 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 UGT1A4P22310 534 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 PKLRP30613 574 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 NSFP46459 744 aaKnown RBP4.94□□□□□ -1.62
HERC4-213ENST00000506515 FHITP49789 147 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 ABCE1P61221 599 aaKnown RBP4.94□□□□□ -1.62
HERC4-213ENST00000506515 HERV-K104P63124 156 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 PPP1R8Q12972 351 aaKnown RBP4.94□□□□□ -1.62
HERC4-213ENST00000506515 WDR43Q15061 677 aaKnown RBP eCLIP4.94□□□□□ -1.62
HERC4-213ENST00000506515 MLF2Q15773 248 aaPredicted RBP4.94□□□□□ -1.62
HERC4-213ENST00000506515 RAB12Q6IQ22 244 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 ZNF730Q6ZMV8 503 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 ZNF497Q6ZNH5 498 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 Q8NBF4 154 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 OR4L1Q8NH43 312 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 GLYATL1Q969I3 302 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 AGAP3Q96P47 875 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 CDX2Q99626 313 aaPredicted RBP4.94□□□□□ -1.62
HERC4-213ENST00000506515 PINK1Q9BXM7 581 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 WWP1Q9H0M0 922 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 DPEP3Q9H4B8 488 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 KCNMB3Q9NPA1 279 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 PIGVQ9NUD9 493 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 ERRFI1Q9UJM3 462 aaPredicted RBP4.94□□□□□ -1.62
HERC4-213ENST00000506515 MRTO4Q9UKD2 239 aaKnown RBP4.94□□□□□ -1.62
HERC4-213ENST00000506515 STRAPQ9Y3F4 350 aaKnown RBP4.94□□□□□ -1.62
HERC4-213ENST00000506515 PRUNE2Q8WUY3 3088 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 MROH5Q6ZUA9 1318 aa4.94□□□□□ -1.62
HERC4-213ENST00000506515 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.93□□□□□ -1.62
HERC4-213ENST00000506515 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.93□□□□□ -1.62
HERC4-213ENST00000506515 NDUFAF8A1L188 74 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 MACROD2A1Z1Q3 448 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 TMCO5BA8MYB1 307 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 ZNF749O43361 778 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 FOSL2P15408 326 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 ZNF18P17022 549 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 PITPNBP48739 271 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 CNN1P51911 297 aaKnown RBP4.93□□□□□ -1.62
HERC4-213ENST00000506515 GEMP55040 296 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 CASP9P55211 416 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 PEX3P56589 373 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 CCNA1P78396 465 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 MFGE8Q08431 387 aaPredicted RBP4.93□□□□□ -1.62
HERC4-213ENST00000506515 MSLNQ13421 630 aaPredicted RBP4.93□□□□□ -1.62
HERC4-213ENST00000506515 MYO9BQ13459 2157 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 NFATC2Q13469 925 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms