RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ARL8AQ96BM9 186 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 PPCDCQ96CD2 204 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 CTHRC1Q96CG8 243 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 SPACA9Q96E40 222 aaPredicted RBP14.72□□□□□ -0.05
LIME1-209ENST00000494776 FCRL1Q96LA6 429 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 FRMD6Q96NE9 622 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 C1orf50Q9BV19 199 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 C20orf27Q9GZN8 174 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 TSPAN10Q9H1Z9 355 aaPredicted RBP14.72□□□□□ -0.05
LIME1-209ENST00000494776 REEP4Q9H6H4 257 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 SACM1LQ9NTJ5 587 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 RYDENQ9NUL5 291 aaKnown RBP14.72□□□□□ -0.05
LIME1-209ENST00000494776 TAS2R7Q9NYW3 318 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 SH3BP4Q9P0V3 963 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 SEC14L3Q9UDX4 400 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 ZNF639Q9UID6 485 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 SETXQ7Z333 2677 aaKnown RBP14.71□□□□□ -0.05
LIME1-209ENST00000494776 SPENQ96T58 3664 aaKnown RBP14.71□□□□□ -0.05
LIME1-209ENST00000494776 MYO1GB0I1T2 1018 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 NPIPA5E9PKD4 350 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 G3V3Y1 287 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 UNC5CO95185 931 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 NADKO95544 446 aaPredicted RBP14.71□□□□□ -0.05
LIME1-209ENST00000494776 CBX7O95931 251 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 H2AFXP16104 143 aaPredicted RBP14.71□□□□□ -0.05
LIME1-209ENST00000494776 ZNF24P17028 368 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 GPX3P22352 226 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 HPCAL1P37235 193 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 TMED10P49755 219 aaKnown RBP14.71□□□□□ -0.05
LIME1-209ENST00000494776 PLGLB1Q02325 96 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 MAD2L1Q13257 205 aaPredicted RBP14.71□□□□□ -0.05
LIME1-209ENST00000494776 CEBPEQ15744 281 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 ZNF791Q3KP31 576 aaPredicted RBP14.71□□□□□ -0.05
LIME1-209ENST00000494776 C6orf136Q5SQH8 315 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 SLC22A10Q63ZE4 541 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 ANKRD26P1Q6NSI1 321 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 FAM47EQ6ZV65 393 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 R3HCC1LQ7Z5L2 792 aaKnown RBP14.71□□□□□ -0.05
LIME1-209ENST00000494776 LIX1Q8N485 282 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 ADIPOR1Q96A54 375 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 ERP27Q96DN0 273 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 ATP6V1G3Q96LB4 118 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 SORT1Q99523 831 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 NPIPA1Q9UND3 350 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 EXO1Q9UQ84 846 aaKnown RBP14.71□□□□□ -0.05
LIME1-209ENST00000494776 EIF3LQ9Y262 564 aaKnown RBP14.71□□□□□ -0.05
LIME1-209ENST00000494776 NBASA2RRP1 2371 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 SHANK1Q9Y566 2161 aa14.71□□□□□ -0.05
LIME1-209ENST00000494776 TP53I11O14683 189 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 TFECO14948 347 aaPredicted RBP14.7□□□□□ -0.06
LIME1-209ENST00000494776 PDPK1O15530 556 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 FBXO45P0C2W1 286 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 PRPS2P11908 318 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 CNR1P21554 472 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 RFC3P40938 356 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 TDGF1P3P51864 188 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 KCNK10P57789 538 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 DCAF7P61962 342 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 RBPJQ06330 500 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 NNATQ16517 81 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 PRSS53Q2L4Q9 553 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 KRTCAP3Q53RY4 240 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 IL23RQ5VWK5 629 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 TMEM64Q6YI46 380 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 GK5Q6ZS86 529 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 FAM26EQ8N5C1 309 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 ZNF441Q8N8Z8 693 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 SIMC1Q8NDZ2 872 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 C17orf47Q8NEP4 570 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 ZFP28Q8NHY6 868 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 MAGED4Q96JG8 741 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 LCORQ96JN0 433 aaPredicted RBP14.7□□□□□ -0.06
LIME1-209ENST00000494776 FAM173AQ9BQD7 235 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 ITPAQ9BY32 194 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 GLIPR2Q9H4G4 154 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 MANSC1Q9H8J5 431 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 VIPAS39Q9H9C1 493 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 ANKRA2Q9H9E1 313 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 PNPOQ9NVS9 261 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 THAP1Q9NVV9 213 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 TAS2R9Q9NYW1 312 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 OSGIN2Q9Y236 505 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 DTX4Q9Y2E6 619 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 NPFFR2Q9Y5X5 522 aa14.7□□□□□ -0.06
LIME1-209ENST00000494776 PLOD3O60568 738 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 COQ9O75208 318 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 SLITRK5O94991 958 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 AGFG2O95081 481 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 CCL3P10147 92 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 GPC1P35052 558 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 RPL3P39023 403 aaKnown RBP14.69□□□□□ -0.06
LIME1-209ENST00000494776 EMDP50402 254 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 RPP38P78345 283 aaKnown RBP14.69□□□□□ -0.06
LIME1-209ENST00000494776 HSPB3Q12988 150 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 DUSP8Q13202 625 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 UBAP2LQ14157 1087 aaKnown RBP14.69□□□□□ -0.06
LIME1-209ENST00000494776 TMEM107Q6UX40 140 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 LYPD8Q6UX82 237 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 PRR22Q8IZ63 422 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 OR2M7Q8NG81 312 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms