RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 OPN5Q6U736 354 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 TMEM107Q6UX40 140 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 C16orf47Q6ZP98 133 aaPredicted RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF551Q7Z340 670 aaPredicted RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 GPALPP1Q8IXQ4 340 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 TAGAPQ8N103 731 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 SLC15A4Q8N697 577 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 OR7G2Q8NG99 324 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 C16orf52Q8NHV5 167 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 TP53INP1Q96A56 240 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 TMEM125Q96AQ2 219 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 COQ8BQ96D53 544 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 C5orf34Q96MH7 638 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 OR52B2Q96RD2 323 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 RASL10BQ96S79 203 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 ZBTB18Q99592 522 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 DUSP26Q9BV47 211 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 BHLHE41Q9C0J9 482 aaPredicted RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 RYDENQ9NUL5 291 aaKnown RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 DDX18Q9NVP1 670 aaKnown RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 HPF1Q9NWY4 346 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 LUZP4Q9P127 313 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 LRFN1Q9P244 771 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 ERVK-11Q9UQG0 969 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 IGSF10Q6WRI0 2623 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 A0A087WV62 115 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 A0A1W2PRB8 838 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 PLOD2O00469 737 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 VIMP08670 466 aaKnown RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 IFI6P09912 130 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 TROVE2P10155 538 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 CD46P15529 392 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 GPX3P22352 226 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 MDH1P40925 334 aaKnown RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 SOX3P41225 446 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 FRKP42685 505 aaPredicted RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 NME5P56597 212 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 NRG3P56975 720 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 SRSF11Q05519 484 aaKnown RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 DPY19L1Q2PZI1 675 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 PRICKLE2Q7Z3G6 844 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 CAMKMTQ7Z624 323 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 CYP4Z2PQ8N1L4 340 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 C17orf47Q8NEP4 570 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 TESCQ96BS2 214 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 ELP4Q96EB1 424 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 MAGED4Q96JG8 741 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 SIKE1Q9BRV8 207 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 CCDC28BQ9BUN5 200 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 NPHS2Q9NP85 383 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 TAS2R9Q9NYW1 312 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 C19orf53Q9UNZ5 99 aaPredicted RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 GPR45Q9Y5Y3 372 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 E9PBE3 544 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 CFLARO15519 480 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 EFNA1P20827 205 aaPredicted RBP11.54□□□□□ -0.56
TRA2A-209ENST00000494255 SOX18P35713 384 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 KIR3DL1P43629 444 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 EMDP50402 254 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 NR0B1P51843 470 aaKnown RBP11.54□□□□□ -0.56
TRA2A-209ENST00000494255 STX1BP61266 288 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 DCAF7P61962 342 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF155Q12901 538 aaPredicted RBP11.54□□□□□ -0.56
TRA2A-209ENST00000494255 MLC1Q15049 377 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 PDCD4Q53EL6 469 aaKnown RBP11.54□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF766Q5HY98 468 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 FHL5Q5TD97 284 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF468Q5VIY5 522 aaPredicted RBP11.54□□□□□ -0.56
TRA2A-209ENST00000494255 TMEM198Q66K66 360 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 IL20RBQ6UXL0 311 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 TMEM178AQ8NBL3 297 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 MDS2Q8NDY4 140 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 VPS37AQ8NEZ2 397 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 OR5P2Q8WZ92 322 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 THOC1Q96FV9 657 aaKnown RBP11.54□□□□□ -0.56
TRA2A-209ENST00000494255 MARK4Q96L34 752 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 SIGLEC12Q96PQ1 595 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 EBF4Q9BQW3 602 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 ITPAQ9BY32 194 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 CCDC134Q9H6E4 229 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 TRIM45Q9H8W5 580 aaPredicted RBP11.54□□□□□ -0.56
TRA2A-209ENST00000494255 ANKRA2Q9H9E1 313 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 C3orf14Q9HBI5 128 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 ATRXP46100 2492 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 COL6A6A6NMZ7 2263 aa11.54□□□□□ -0.56
TRA2A-209ENST00000494255 TTLL8A6PVC2 850 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 CAPN14A8MX76 684 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 ANKRD28O15084 1053 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 SUV39H1O43463 412 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 SLC25A12O75746 678 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 OR6B1O95007 311 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 S100A3P33764 101 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 CDK9P50750 372 aaKnown RBP11.53□□□□□ -0.56
TRA2A-209ENST00000494255 UFM1P61960 85 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 DUSP8Q13202 625 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 ANXA8L1Q5VT79 327 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 SPINK14Q6IE38 97 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 OR4F3Q6IEY1 312 aa11.53□□□□□ -0.56
TRA2A-209ENST00000494255 SZRD1Q7Z422 152 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms