RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 C2orf27AQ580R0 203 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TJAP1Q5JTD0 557 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TPRG1LQ5T0D9 272 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D3GQ6DHY5 549 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D3CQ6IPX1 549 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PODNL1Q6PEZ8 512 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 USP30Q70CQ3 517 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 RRM2BQ7LG56 351 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 CACUL1Q86Y37 369 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D3Q8IZP1 549 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 OR4K5Q8NGD3 323 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 OR8K5Q8NH50 307 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 NT5CQ8TCD5 201 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 GNPDA2Q8TDQ7 276 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 LCN9Q8WX39 176 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 OTUB1Q96FW1 271 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ACTRT3Q9BYD9 372 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PLA2G2FQ9BZM2 168 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 C6orf62Q9GZU0 229 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 KRCC1Q9NPI7 259 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 C11orf16Q9NQ32 467 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 CHCHD3Q9NX63 227 aaKnown RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PCDH10Q9P2E7 1040 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ANKMY1Q9P2S6 941 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 KLHL3Q9UH77 587 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 CES1P1Q9UKY3 287 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PCOLCE2Q9UKZ9 415 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ATG4BQ9Y4P1 393 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ALPK3Q96L96 1907 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 A0A0G2JN53 185 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PRSS38A1L453 326 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 OR52A4PA6NMU1 304 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 LOC110117498-PIK3R3F6TDL0 507 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 APBB3O95704 486 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ALPPP05187 535 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ASGR2P07307 311 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 CHRM5P08912 532 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 NR2F6P10588 404 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 DBTP11182 482 aaKnown RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 LAMP2P13473 410 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 CD72P21854 359 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TGM1P22735 817 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PRKAR1BP31321 381 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TIE1P35590 1138 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ETV6P41212 452 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 GIPRP48546 466 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ADPRHP54922 357 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 DEFA1P59665 94 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 DEFA3P59666 94 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 CDC20Q12834 499 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PIN1Q13526 163 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 LASP1Q14847 261 aaKnown RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 KIR2DS3Q14952 304 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 SUZ12Q15022 739 aaKnown RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TRAM2Q15035 370 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 SPHARQ15513 63 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ZNF311Q5JNZ3 666 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 SPANXN2Q5MJ10 180 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ANKRD54Q6NXT1 300 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 CCDC116Q8IYX3 515 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 CYP4Z2PQ8N1L4 340 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 FLCNQ8NFG4 579 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 OR5D16Q8NGK9 328 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ZFPM2Q8WW38 1151 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PIK3R3Q92569 461 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ELP4Q96EB1 424 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 CNRIP1Q96F85 164 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 SLC38A2Q96QD8 506 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 IL4I1Q96RQ9 567 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 CHCHD6Q9BRQ6 235 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TAPBPLQ9BX59 468 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 KLHL31Q9H511 634 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PRDM8Q9NQV8 689 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 DIMT1Q9UNQ2 313 aaKnown RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ZNF232Q9UNY5 417 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 MYO10Q9HD67 2058 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 PRAMEF27A3QJZ7 478 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 K7EQS6 105 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 TNFRSF10CO14798 259 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 MYL12BO14950 172 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 SEMA7AO75326 666 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 TNNI3P19429 210 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 PSMD7P51665 324 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 TAS2R41P59536 307 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF91Q05481 1191 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 MLLT11Q13015 90 aaPredicted RBP9.08□□□□□ -0.96
NPHP3-209ENST00000493732 GPR19Q15760 415 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 TSTQ16762 297 aaKnown RBP9.08□□□□□ -0.96
NPHP3-209ENST00000493732 LEXMQ3ZCV2 418 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 PERM1Q5SV97 790 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 AGAP7PQ5VUJ5 663 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 C16orf62Q7Z3J2 963 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 ASPGQ86U10 573 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 PAQR7Q86WK9 346 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 RBM45Q8IUH3 476 aaKnown RBP9.08□□□□□ -0.96
NPHP3-209ENST00000493732 SLC34A3Q8N130 599 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 NANOGP1Q8N7R0 232 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 AMER3Q8N944 861 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 NUP43Q8NFH3 380 aa9.08□□□□□ -0.96
NPHP3-209ENST00000493732 TEX47Q8TBZ9 253 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms