RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ICKQ9UPZ9 632 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 LRP4O75096 1905 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 A0A1W2PQ72 361 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 hCG_2039718K7EN88 272 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 CPNE3O75131 537 aaKnown RBP12.96□□□□□ -0.33
COPS7B-221ENST00000488111 CLDN9O95484 217 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 PTHP01270 115 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 EBLN1P0CF75 366 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 OLR1P78380 273 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 FAPQ12884 760 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 HYAL2Q12891 473 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 XKR6Q5GH73 641 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 LRIF1Q5T3J3 769 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 BMP8AQ7Z5Y6 402 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 TRIM48Q8IWZ4 208 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 RDH10Q8IZV5 341 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 ATG16L2Q8NAA4 619 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 DNAJB8Q8NHS0 232 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 SLC37A2Q8TED4 501 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 ZDHHC1Q8WTX9 485 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 MARVELD3Q96A59 401 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 SGPP1Q9BX95 441 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 CLMPQ9H6B4 373 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 FARSBQ9NSD9 589 aaKnown RBP12.96□□□□□ -0.33
COPS7B-221ENST00000488111 SPASTQ9UBP0 616 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 PILRBQ9UKJ0 227 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 HEBP2Q9Y5Z4 205 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 YY2O15391 372 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 CCNDBP1O95273 360 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 GNSP15586 552 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 RAB28P51157 221 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 IRF8Q02556 426 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ELOCQ15369 112 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 TEAD4Q15561 434 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 BAK1Q16611 211 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 DEFB133Q30KQ1 61 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 XKRXQ6PP77 449 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ZNF761Q86XN6 746 aaPredicted RBP12.95□□□□□ -0.34
COPS7B-221ENST00000488111 RNF130Q86XS8 419 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 NELL1Q92832 810 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 CRELD1Q96HD1 420 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 DPY30Q9C005 99 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 MMP28Q9H239 520 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 TAC3Q9UHF0 121 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 KLHL20Q9Y2M5 609 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 KCNE2Q9Y6J6 123 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ERN1O75460 977 aaKnown RBP12.95□□□□□ -0.34
COPS7B-221ENST00000488111 VIPP01282 170 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 FABP3P05413 133 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ERGP11308 486 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 SLC2A4P14672 509 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 HOXB9P17482 250 aaPredicted RBP12.95□□□□□ -0.34
COPS7B-221ENST00000488111 CD22P20273 847 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 HNRNPKP61978 463 aaKnown RBP eCLIP12.95□□□□□ -0.342e-7■■■□□ 17.3
COPS7B-221ENST00000488111 RPL38P63173 70 aaKnown RBP12.95□□□□□ -0.34
COPS7B-221ENST00000488111 MEF2AQ02078 507 aaPredicted RBP12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ABHD18Q0P651 414 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 TNK1Q13470 666 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ASAH1Q13510 395 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 DOC2AQ14183 400 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ABRAXAS2Q15018 415 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ZNF79Q15937 498 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ESCO2Q56NI9 601 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 PRAMEF13Q5VWM6 474 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ZNF767PQ75MW2 155 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ZNF367Q7RTV3 350 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 TMPRSS11BQ86T26 416 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ESX1Q8N693 406 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 LCN9Q8WX39 176 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ASB15Q8WXK1 588 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 SRRQ9GZT4 340 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 SLC22A4Q9H015 551 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 ZSCAN32Q9NX65 697 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 CPNE7Q9UBL6 633 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 SNX7Q9UNH6 387 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 SAMHD1Q9Y3Z3 626 aaKnown RBP12.95□□□□□ -0.34
COPS7B-221ENST00000488111 FANCMQ8IYD8 2048 aa12.95□□□□□ -0.34
COPS7B-221ENST00000488111 TEX51A0A1B0GUA7 166 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 A0A1W2PPV9 198 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 SLC35F4A4IF30 521 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 TFECO14948 347 aaPredicted RBP12.94□□□□□ -0.34
COPS7B-221ENST00000488111 ZNF682O95780 498 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 GGT2P36268 569 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 CRISP3P54108 245 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 TEKQ02763 1124 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 GPR18Q14330 331 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 ARHGAP19Q14CB8 494 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 TIMM50Q3ZCQ8 353 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 TIGD3Q6B0B8 471 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 KLHDC8AQ8IYD2 350 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 VWA5B2Q8N398 1253 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 CHCHD4Q8N4Q1 142 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 RAB42Q8N4Z0 105 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 OR4M1Q8NGD0 313 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 WDFY2Q96P53 400 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 KIR3DX1Q9H7L2 352 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 MAN2B2Q9Y2E5 1009 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 DYRK1BQ9Y463 629 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 SNX8Q9Y5X2 465 aa12.94□□□□□ -0.34
COPS7B-221ENST00000488111 A0A0B4J293 547 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms