RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MND1Q9BWT6 205 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 ROGDIQ9GZN7 287 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 SEC14L4Q9UDX3 406 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 SNX7Q9UNH6 387 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 TRAPPC4Q9Y296 219 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 SNX11Q9Y5W9 270 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 A0A0G2JN53 185 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 PRAMEF27A3QJZ7 478 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 OR12D1P0DN82 309 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 CD72P21854 359 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 HIST1H1TP22492 207 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-208ENST00000487245 NCBP2P52298 156 aaKnown RBP eCLIP24.62■■□□□ 1.53
HLA-C-208ENST00000487245 DOC2BQ14184 412 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 ABHD17CQ6PCB6 329 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 OR2L5Q8NG80 312 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 KLHL31Q9H511 634 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 PRDM7Q9NQW5 492 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 ZCCHC3Q9NUD5 404 aaKnown RBP24.62■■□□□ 1.53
HLA-C-208ENST00000487245 ASB4Q9Y574 426 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 NR2F1P10589 423 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 SPANXN2Q5MJ10 180 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 KIAA1211LQ6NV74 962 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 RBM45Q8IUH3 476 aaKnown RBP24.61■■□□□ 1.53
HLA-C-208ENST00000487245 FAM26EQ8N5C1 309 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 NANOGP1Q8N7R0 232 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 MFSD9Q8NBP5 474 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 FLCNQ8NFG4 579 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 PROKR2Q8NFJ6 384 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 SLC7A13Q8TCU3 470 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 FGF14Q92915 247 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 POLDIP3Q9BY77 421 aaKnown RBP24.61■■□□□ 1.53
HLA-C-208ENST00000487245 NUAK2Q9H093 628 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 SCML1Q9UN30 329 aa24.61■■□□□ 1.53
HLA-C-208ENST00000487245 MKI67P46013 3256 aaKnown RBP24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TBC1D3DA0A087WVF3 549 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TBC1D3IA0A087WXS9 549 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TBC1D3EA0A087X179 549 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TBC1D3KA0A087X1G2 549 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TBC1D3FA6NER0 549 aaPredicted RBP24.6■■□□□ 1.53
HLA-C-208ENST00000487245 OR52A4PA6NMU1 304 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TBC1D3LB9A6J9 549 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 ERI3O43414 337 aaKnown RBP24.6■■□□□ 1.53
HLA-C-208ENST00000487245 CSO75390 466 aaKnown RBP24.6■■□□□ 1.53
HLA-C-208ENST00000487245 UGT2B17O75795 530 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TBC1D3HP0C7X1 549 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 ATP5A1P25705 553 aaKnown RBP24.6■■□□□ 1.53
HLA-C-208ENST00000487245 NDUFS1P28331 727 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 SOX9P48436 509 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 ADPRHP54922 357 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 ZNF91Q05481 1191 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 HYAL2Q12891 473 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 LRRC32Q14392 662 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 SPHARQ15513 63 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TBC1D3GQ6DHY5 549 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TBC1D3CQ6IPX1 549 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TBC1D3Q8IZP1 549 aaPredicted RBP24.6■■□□□ 1.53
HLA-C-208ENST00000487245 VANGL1Q8TAA9 524 aaPredicted RBP24.6■■□□□ 1.53
HLA-C-208ENST00000487245 XAGE5Q8WWM1 108 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 UCN3Q969E3 161 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 SLC6A18Q96N87 628 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 MKRN2Q9H000 416 aaKnown RBP24.6■■□□□ 1.53
HLA-C-208ENST00000487245 DNAJC27Q9NZQ0 273 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TRPC4Q9UBN4 977 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 KCNK2O95069 426 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 PBX2P40425 430 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 DEFA1P59665 94 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 DEFA3P59666 94 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 TGM3Q08188 693 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 SYPL1Q16563 259 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 ACOT4Q8N9L9 421 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 EFHD2Q96C19 240 aaPredicted RBP24.6■■□□□ 1.53
HLA-C-208ENST00000487245 KLHL25Q9H0H3 589 aa24.6■■□□□ 1.53
HLA-C-208ENST00000487245 H3BN98 237 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 PPM1DO15297 605 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 SOX14O95416 240 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 IGFBP1P08833 259 aaPredicted RBP24.59■■□□□ 1.53
HLA-C-208ENST00000487245 GTF2E2P29084 291 aaKnown RBP24.59■■□□□ 1.53
HLA-C-208ENST00000487245 KIAA1024LP59773 190 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 STXBP1P61764 594 aaKnown RBP24.59■■□□□ 1.53
HLA-C-208ENST00000487245 SELENBP1Q13228 472 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 PRAMEF8Q5VWM4 474 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 PRAMEF7Q5VXH5 474 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 OR56A1Q8NGH5 318 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 HTRA1Q92743 480 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 OR2M4Q96R27 311 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 PBX4Q9BYU1 374 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 ENTPD4Q9Y227 616 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 PCDHGA4Q9Y5G9 962 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 DOCK9Q9BZ29 2069 aa24.59■■□□□ 1.53
HLA-C-208ENST00000487245 SEPHS1P49903 392 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 MLLT11Q13015 90 aaPredicted RBP24.58■■□□□ 1.53
HLA-C-208ENST00000487245 SHHQ15465 462 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 TMEM196Q5HYL7 178 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 PPP2R2DQ66LE6 453 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 ZNF425Q6IV72 752 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 PODNL1Q6PEZ8 512 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 SZRD1Q7Z422 152 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 OR8K5Q8NH50 307 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 WFDC6Q9BQY6 131 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 TSSK6Q9BXA6 273 aa24.58■■□□□ 1.53
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