RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SLC25A35Q3KQZ1 300 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 FAM153CQ494X1 144 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 TCHHL1Q5QJ38 904 aaPredicted RBP12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 RIPPLY2Q5TAB7 128 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 TIFABQ6ZNK6 161 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 LCA5Q86VQ0 697 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 SIMC1Q8NDZ2 872 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 TM4SF18Q96CE8 201 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 MTBPQ96DY7 904 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 RILPQ96NA2 401 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 SLC6A15Q9H2J7 730 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 EPB41L4BQ9H329 900 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 VPS29Q9UBQ0 182 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 KCNN3Q9UGI6 736 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 BCAP29Q9UHQ4 241 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 CES1P1Q9UKY3 287 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 AKAP9Q99996 3911 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 ULK1O75385 1050 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 ESRRBO95718 433 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 ATP1B1P05026 303 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 HPNP05981 417 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 HSD3B1P14060 373 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 S1PR1P21453 382 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 GPX3P22352 226 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 HSD3B2P26439 372 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 FEN1P39748 380 aaKnown RBP12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 ADH7P40394 386 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 CASP3P42574 277 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 ALDH9A1P49189 494 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 DCAF7P61962 342 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 GALNT1Q10472 559 aaPredicted RBP12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 MYBPHQ13203 477 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 RASA2Q15283 850 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 TOMM20Q15388 145 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 PRICKLE4Q2TBC4 344 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 FAM111BQ6SJ93 734 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 TRMT10CQ7L0Y3 403 aaKnown RBP12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 NUP54Q7Z3B4 507 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 CDH24Q86UP0 819 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 IFT20Q8IY31 132 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 PM20D2Q8IYS1 436 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 ULK2Q8IYT8 1036 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 CNPY4Q8N129 248 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 VWA5B2Q8N398 1253 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 KLHL29Q96CT2 875 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 HSPBAP1Q96EW2 488 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 LRRC46Q96FV0 321 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 TMEM41AQ96HV5 264 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 GNRHR2Q96P88 292 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 HBEGFQ99075 208 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 TMEM216Q9P0N5 145 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 PRODH2Q9UF12 536 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 NFU1Q9UMS0 254 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 DTX4Q9Y2E6 619 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 STK38LQ9Y2H1 464 aa12.32□□□□□ -0.44
CTDSP1-208ENST00000482272 PKDREJQ9NTG1 2253 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 KIAA1549Q9HCM3 1950 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 KIF2AO00139 706 aaPredicted RBP12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 MANBAO00462 879 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 PPM1BO75688 479 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 EPPINO95925 133 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 ABCB1P08183 1280 aaPredicted RBP12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 ABHD2P08910 425 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 CHN1P15882 459 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 IMPDH1P20839 514 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 ABCD3P28288 659 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 HMOX2P30519 316 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 PEX19P40855 299 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 MGAT2Q10469 447 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 UNC50Q53HI1 259 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 ZNF678Q5SXM1 525 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 BICRALQ6AI39 1079 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 SLC30A6Q6NXT4 461 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 FAM180BQ6P0A1 224 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 WDR53Q7Z5U6 358 aaPredicted RBP12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 TMEM200AQ86VY9 491 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 LIX1LQ8IVB5 337 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 SLC22A9Q8IVM8 553 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 GSPT2Q8IYD1 628 aaKnown RBP12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 PRR22Q8IZ63 422 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 C1orf52Q8N6N3 182 aaKnown RBP12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 CEP112Q8N8E3 955 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 CDYL2Q8N8U2 506 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 OR1J4Q8NGS1 313 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 METTL6Q8TCB7 284 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 MZB1Q8WU39 189 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 LCORQ96JN0 433 aaPredicted RBP12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 TIMP4Q99727 224 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 TXLNGYQ9BZA5 131 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 NXF5Q9H1B4 397 aaKnown RBP12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 METTL7AQ9H8H3 244 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 MAT2BQ9NZL9 334 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 ZNF639Q9UID6 485 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 MCM8Q9UJA3 840 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 DNAJC13O75165 2243 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 NINQ8N4C6 2090 aa12.31□□□□□ -0.44
CTDSP1-208ENST00000482272 CCDC151A5D8V7 595 aa12.3□□□□□ -0.44
CTDSP1-208ENST00000482272 KDM4EB2RXH2 506 aaPredicted RBP12.3□□□□□ -0.44
CTDSP1-208ENST00000482272 DVL2O14641 736 aa12.3□□□□□ -0.44
CTDSP1-208ENST00000482272 GNB5O14775 395 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms