RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 HRKO00198 91 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 ACOT8O14734 319 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 TNFRSF21O75509 655 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 CBX7O95931 251 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 CD63P08962 238 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 RBMS1P29558 406 aaKnown RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 PRIM2P49643 509 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 PGDP52209 483 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 TRAP1Q12931 704 aaKnown RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 BNIP2Q12982 314 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 LASP1Q14847 261 aaKnown RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 ELAVL1Q15717 326 aaKnown RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 ADRM1Q16186 407 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 TNFAIP8L2Q6P589 184 aaPredicted RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 ANKRD37Q7Z713 158 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 PTOV1Q86YD1 416 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 ZZZ3Q8IYH5 903 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 ESX1Q8N693 406 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 TNIP2Q8NFZ5 429 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 CT55Q8WUE5 264 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 METTL21AQ8WXB1 218 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 ASB9Q96DX5 294 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 GIMAP5Q96F15 307 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 REXO5Q96IC2 774 aaKnown RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 ZNF578Q96N58 590 aaPredicted RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 MS4A4EQ96PG1 132 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 CNPPD1Q9BV87 410 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 SPATA9Q9BWV2 254 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 OR51I1Q9H343 314 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 DENND2DQ9H6A0 471 aaPredicted RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 BCAP29Q9UHQ4 241 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 FAF1Q9UNN5 650 aaPredicted RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 ERVK-19Q9WJR5 959 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 PTRH2Q9Y3E5 179 aaKnown RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 FAM186AA6NE01 2351 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 WDR87Q6ZQQ6 2873 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 GSTA4O15217 222 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 NME6O75414 186 aaPredicted RBP16.39■□□□□ 0.21
UPF3A-206ENST00000480362 BCAS2O75934 225 aaPredicted RBP16.39■□□□□ 0.21
UPF3A-206ENST00000480362 CYC1P08574 325 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 OR12D1P0DN82 309 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 BMP2P12643 396 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 NCK1P16333 377 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 TCN2P20062 427 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 SSTR4P31391 388 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 DSTNP60981 165 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 ELF3P78545 371 aaPredicted RBP16.39■□□□□ 0.21
UPF3A-206ENST00000480362 FUT7Q11130 342 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 DUSP8Q13202 625 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 MAP7Q14244 749 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 KPNB1Q14974 876 aaKnown RBP16.39■□□□□ 0.21
UPF3A-206ENST00000480362 GCNT6Q5T4J0 391 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 FAM69BQ5VUD6 431 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 GLYATQ6IB77 296 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 MFSD12Q6NUT3 480 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 ERICH5Q6P6B1 374 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 PTRH1Q86Y79 214 aaKnown RBP16.39■□□□□ 0.21
UPF3A-206ENST00000480362 NLGN4XQ8N0W4 816 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 ENDOVQ8N8Q3 282 aaKnown RBP16.39■□□□□ 0.21
UPF3A-206ENST00000480362 NLGN4YQ8NFZ3 816 aaPredicted RBP16.39■□□□□ 0.21
UPF3A-206ENST00000480362 OR52R1Q8NGF1 315 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 MIPOL1Q8TD10 442 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 RAB8BQ92930 207 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 ACTRT3Q9BYD9 372 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 CLCA3PQ9Y6N3 262 aa16.39■□□□□ 0.21
UPF3A-206ENST00000480362 CCDC88CQ9P219 2028 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 HMGN4O00479 90 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 ARPC2O15144 300 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 DYRK3O43781 588 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 BRINP1O60477 761 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 RAD1O60671 282 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 COQ9O75208 318 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 KLF7O75840 302 aaPredicted RBP16.38■□□□□ 0.21
UPF3A-206ENST00000480362 PSMG1O95456 288 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 UMODP07911 640 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 RAB40ALP0C0E4 278 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 PLA2G5P39877 138 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 MAGEA8P43361 318 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 KHKP50053 298 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 ANXA11P50995 505 aaKnown RBP16.38■□□□□ 0.21
UPF3A-206ENST00000480362 FLOT2Q14254 428 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 FXNQ16595 210 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 VMACQ2NL98 169 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 SFT2D3Q587I9 215 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 CDC73Q6P1J9 531 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 TMEM205Q6UW68 189 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 WDR53Q7Z5U6 358 aaPredicted RBP16.38■□□□□ 0.21
UPF3A-206ENST00000480362 DHFR2Q86XF0 187 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 OR5D16Q8NGK9 328 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 OR14A16Q8NHC5 309 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 FBXO30Q8TB52 745 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 XAGE5Q8WWM1 108 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 MAL2Q969L2 176 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 OTUB1Q96FW1 271 aaPredicted RBP16.38■□□□□ 0.21
UPF3A-206ENST00000480362 SENP5Q96HI0 755 aaPredicted RBP16.38■□□□□ 0.21
UPF3A-206ENST00000480362 OR10A5Q9H207 317 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 MUC13Q9H3R2 512 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 TMEM38AQ9H6F2 299 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 ACTR3BQ9P1U1 418 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 FARSAQ9Y285 508 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms